Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000176_P001 | Maize | nucleus | 44.14 | 80.0 |
| Os10t0560400-01 | Rice | cytosol, nucleus, plastid | 40.99 | 61.28 |
| TraesCS1D01G221800.1 | Wheat | nucleus | 36.71 | 56.4 |
| TraesCS1A01G220300.1 | Wheat | nucleus | 36.94 | 56.36 |
| TraesCS1B01G233600.1 | Wheat | nucleus | 36.49 | 56.06 |
| GSMUA_Achr5P15400_001 | Banana | nucleus | 19.82 | 50.87 |
| GSMUA_Achr5P13470_001 | Banana | nucleus | 16.67 | 40.22 |
| OQU81054 | Sorghum | cytosol, extracellular, nucleus | 21.4 | 38.78 |
| GSMUA_Achr4P30370_001 | Banana | nucleus | 23.87 | 37.19 |
| HORVU1Hr1G056120.3 | Barley | cytosol | 22.97 | 34.46 |
Protein Annotations
| EnsemblPlants:OQU92139 | EnsemblPlantsGene:SORBI_3001G298400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 | PANTHER:PTHR31319 |
| PANTHER:PTHR31319:SF9 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:OQU92139 | ProteinID:OQU92139.1 | SEG:seg |
| UniParc:UPI000B8BA6BB | UniProt:A0A1Z5S8I6 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:57918399..57922897
Molecular Weight (calculated)
46014.0 Da
IEP (calculated)
9.801
GRAVY (calculated)
-0.506
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MANGESPNDP ASGGTRKVAP DPPRKNPSHL ISLAPLSLAA SASRRARTYS SPRPSLLLSL SSPPHTTTPS LPAPPSEARE LAAGRPGKQT SKWRERQRER
101: ETELITNHTG RCVVEGWRRK REGPAGVVKR VSSYIHTCGG DVVVRRMSAS ASSAACRVCG GGVGECACHH GHGGIGGGAR CGVAVADLNR GFPGMWHHQH
201: QPEEEPGGVV VGSGAAAAAA GLHEFQFFGH DEDHDSVTWL FNDPAPHLHR GPAPAATVGN GVAAEAAEQP RAPPPLFDGY AHAHAPYGQL PGHGLTFDVP
301: LGRGGEVQAS AAVLEAGLGL GGGGGGGGSN PATTSSGATI MSLCGSTFTD AASAVPGDAA NGSASGADPA VDREAKVMRY KEKRKRRRYE KQIRYASRKA
401: YAEMRPRVKG RFAKVPDGDA PAPPAPAAAA GYKPGRLDLG WFRS
101: ETELITNHTG RCVVEGWRRK REGPAGVVKR VSSYIHTCGG DVVVRRMSAS ASSAACRVCG GGVGECACHH GHGGIGGGAR CGVAVADLNR GFPGMWHHQH
201: QPEEEPGGVV VGSGAAAAAA GLHEFQFFGH DEDHDSVTWL FNDPAPHLHR GPAPAATVGN GVAAEAAEQP RAPPPLFDGY AHAHAPYGQL PGHGLTFDVP
301: LGRGGEVQAS AAVLEAGLGL GGGGGGGGSN PATTSSGATI MSLCGSTFTD AASAVPGDAA NGSASGADPA VDREAKVMRY KEKRKRRRYE KQIRYASRKA
401: YAEMRPRVKG RFAKVPDGDA PAPPAPAAAA GYKPGRLDLG WFRS
001: MASKLCDSCK SATAALYCRP DAAFLCLSCD SKVHAANKLA SRHARVWMCE VCEQAPAHVT CKADAAALCV TCDRDIHSAN PLARRHERVP VTPFYDSVSS
101: DGSVKHTAVN FLDDCYFSDI DGNGSREEEE EEAASWLLLP NPKTTTTATA GIVAVTSAEE VPGDSPEMNT GQQYLFSDPD PYLDLDYGNV DPKVESLEQN
201: SSGTDGVVPV ENRTVRIPTV NENCFEMDFT GGSKGFTYGG GYNCISHSVS SSSMEVGVVP DGGSVADVSY PYGGPATSGA DPGTQRAVPL TSAEREARVM
301: RYREKRKNRK FEKTIRYASR KAYAEMRPRI KGRFAKRTDT NESNDVVGHG GIFSGFGLVP TF
101: DGSVKHTAVN FLDDCYFSDI DGNGSREEEE EEAASWLLLP NPKTTTTATA GIVAVTSAEE VPGDSPEMNT GQQYLFSDPD PYLDLDYGNV DPKVESLEQN
201: SSGTDGVVPV ENRTVRIPTV NENCFEMDFT GGSKGFTYGG GYNCISHSVS SSSMEVGVVP DGGSVADVSY PYGGPATSGA DPGTQRAVPL TSAEREARVM
301: RYREKRKNRK FEKTIRYASR KAYAEMRPRI KGRFAKRTDT NESNDVVGHG GIFSGFGLVP TF
Arabidopsis Description
COL4Zinc finger protein CONSTANS-LIKE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q940T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.