Factsheet for Os10t0560400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000176_P001	Maize	nucleus	53.87	65.31
TraesCS1D01G221800.1	Wheat	nucleus	57.58	59.17
TraesCS1B01G233600.1	Wheat	nucleus	57.24	58.82
TraesCS1A01G220300.1	Wheat	nucleus	57.58	58.76
Zm00001d029885_P001	Maize	cytosol, nucleus, plastid	55.56	58.3
GSMUA_Achr5P15400_001	Banana	nucleus	29.29	50.29
Os07t0261200-01	Rice	nucleus	41.08	47.47
OQU92139	Sorghum	nucleus	61.28	40.99
GSMUA_Achr5P13470_001	Banana	nucleus	24.92	40.22
GSMUA_Achr4P30370_001	Banana	nucleus	34.34	35.79
HORVU1Hr1G056120.3	Barley	cytosol	34.34	34.46

Protein Annotations

MapMan:35.1	EntrezGene:4349376	ProteinID:AAL79780.1	ProteinID:AAP55007.1	EMBL:AK109732	ProteinID:BAF27215.1
ProteinID:BAT12047.1	InterPro:CCT_domain	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150
GO:GO:0009416	GO:GO:0009628	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	InterPro:IPR010402
EnsemblPlantsGene:Os10g0560400	EnsemblPlants:Os10t0560400-01	PFAM:PF06203	PFscan:PS51017	PANTHER:PTHR31319	PANTHER:PTHR31319:SF9
UniProt:Q7XC67	UniParc:UPI00000A0DF0	RefSeq:XP_015613219.1	SEG:seg	:	:

Description

CCT domain-containing gene 35, CCT (CO, CO-LIKE and TOC1) domain protein 35, CCT domain protein 35, CCT MOTIF FAMILY (CMF) gene 11Similar to CONSTANS-like protein CO9 (Fragment). (Os10t0560400-01)

Coordinates

chr10:-:22069784..22072449

Molecular Weight (calculated)

30208.3 Da

IEP (calculated)

7.852

GRAVY (calculated)

-0.364

Length

297 amino acids

Sequence
(BLAST)

001: MSAASGAACG VCGGGVGECG CLLHQRRGGG GGGGGGGVRC GIAADLNRGF PAIFQGVGVE ETAVEGDGGA QPAAGLQEFQ FFGHDDHDSV AWLFNDPAPP
101: GGTDHQLHRQ TAPMAVGNGA AAAQQRQAFD AYAQYQPGHG LTFDVPLTRG EAAAAVLEAS LGLGGAGAGG RNPATSSSTI MSFCGSTFTD AVSSIPKDHA
201: AAAAVVANGG LSGGGGDPAM DREAKVMRYK EKRKRRRYEK QIRYASRKAY AEMRPRVKGR FAKVPDGELD GATPPPPSSA AGGGYEPGRL DLGWFRS

Best Arabidopsis Sequence Match ( AT5G57660.1 )
(BLAST)

001: MGFGLESIKS ISGGWGAAAR SCDACKSVTA AVFCRVDSAF LCIACDTRIH SFTRHERVWV CEVCEQAPAA VTCKADAAAL CVSCDADIHS ANPLASRHER
101: VPVETFFDSA ETAVAKISAS STFGILGSST TVDLTAVPVM ADDLGLCPWL LPNDFNEPAK IEIGTENMKG SSDFMFSDFD RLIDFEFPNS FNHHQNNAGG
201: DSLVPVQTKT EPLPLTNNDH CFDIDFCRSK LSAFTYPSQS VSHSVSTSSI EYGVVPDGNT NNSVNRSTIT SSTTGGDHQA SSMDREARVL RYREKRKNRK
301: FEKTIRYASR KAYAESRPRI KGRFAKRTET ENDDIFLSHV YASAAHAQYG VVPTF

Arabidopsis Description

COL5Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.