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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 5
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
EpiLoc:peroxisome
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:peroxisome
WoLF PSORT:cytosol
YLoc:peroxisome
 cytosol: 19685898
golgi: 25047511
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19685898 doi
KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita
Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G086700.2 Wheat peroxisome 90.23 90.61
TraesCS3D01G086900.3 Wheat peroxisome 90.1 90.47
TraesCS3B01G102100.1 Wheat golgi, peroxisome, unclear 90.1 90.47
KXG32465 Sorghum peroxisome 89.82 90.32
Zm00001d009182_P009 Maize extracellular, mitochondrion, peroxisome, plasma membrane 89.55 90.04
HORVU3Hr1G015590.13 Barley peroxisome 88.58 88.34
HORVU2Hr1G070450.22 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 49.52 85.71
HORVU1Hr1G027810.27 Barley peroxisome 24.9 83.03
Os05t0155000-01 Rice peroxisome 77.72 78.04
Os05t0362100-01 Rice cytosol, mitochondrion, peroxisome 41.54 64.95
Os02t0274100-01 Rice plasma membrane 58.46 58.54
Os02t0654000-01 Rice mitochondrion 11.28 27.89
Os01t0796400-01 Rice nucleus 11.42 27.48
Os02t0654100-01 Rice mitochondrion 10.04 24.33
Os03t0310400-01 Rice extracellular, nucleus, plasma membrane 8.8 23.88
Os01t0925200-01 Rice nucleus, plasma membrane 8.94 22.34
Os01t0662700-01 Rice mitochondrion 8.94 19.64
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720
Gene3D:3.90.226.10InterPro:3HC_DH_CEntrezGene:4326503MapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfEMBL:AK100444
ProteinID:BAB63893.1ProteinID:BAB93398.1ProteinID:BAF04887.1ProteinID:BAS72013.1ProteinID:BAS72014.1InterPro:ClpP/crotonase-like_dom_sf
ProteinID:EAZ11803.1InterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003857GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005777GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0055114GO:GO:0070403EMBL:KF214529
InterPro:NAD(P)-bd_dom_sfEnsemblPlantsGene:Os01g0348600EnsemblPlants:Os01t0348600-01PFAM:PF00378PFAM:PF00725PFAM:PF02737
ScanProsite:PS00067ScanProsite:PS00166PANTHER:PTHR23309PANTHER:PTHR23309:SF23UniProt:Q94CN1SUPFAM:SSF48179
SUPFAM:SSF51735SUPFAM:SSF52096UniParc:UPI00000ABC96RefSeq:XP_015621075.1SEG:seg:
Description
Similar to MFP2 (Fatty acid multifunctional protein) (AtMFP2). (Os01t0348600-01);Similar to glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a. (Os01t0348600-02);Similar to glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a. (Os01t0348600-03)
Coordinates
chr1:+:13887272..13893148
Molecular Weight (calculated)
79396.3 Da
IEP (calculated)
8.975
GRAVY (calculated)
0.028
Length
727 amino acids
Sequence
(BLAST)
001: MAAAAAAKGR TEMEVGADGV AVITICNPPV NSLSIDVLLS LKENYAEALR RNDVKAIVVT GKGGKFSGGF DISSFGSVQG GKVEQPKVGY ISIDIITDTL
101: EAATKPSVAA IDGLALGGGL EVAMACHARI STPTAQLGLP ELQLGVIPGF GGTQRLPRLV GLTKALEMML LSKPIKGAEA HQLGLVDSLV SADDLVNTAR
201: RWALDICELK RPWIKSLYKT DKLEPLGEAR EILKFARAQA RRQAANLEHP LVCIDVIEEG IVSGPRAGLW KEANAFQGLL FADTCKNLVH VFFSQRATSK
301: VPGATDLGLM PRKVTKVAIL GGGLMGSGIA TAMILSNYPV ILKEVNEKFL NAGIDRIKAN LQSRVRKGKM TEERYEKAMS LVTGVLDYER FKDVDLVIEA
401: VIENVKLKQQ IFSDLEKYCP SHCVLATNTS TIDLNLIGEK TRSKDRIVGA HFFSPAHVMP LLEIVRTQHT SPQVVVDLLD VGKKIKKTPI VVGNCTGFAV
501: NRMFFPYTQS ALLFVDLGMD VYKIDRACTK FGMPMGPFRL ADLVGFGVAA ATGMQYLENF PERVYKSMLI PLMMEDKRTG EASRKGFYKY EDKRKATPDP
601: EIMKYIEKSR SMAGVTPDTE LMKLSEKDIV EMVFFPVINE ACRVLDEGIA VKASDLDIAS IFGMGFPPYR GGIMFWADSI GAKYIHDKLE VWAKRYSDIF
701: KPCSYLAERA ANGVPLSAPA KQVKARL
Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)
001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
Arabidopsis Description
MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.