Factsheet for Os01t0815800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 19621931
nucleus: 23777608
plastid: 27992503

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0708900-01	Rice	nucleus	17.28	5.56
Os03t0712200-01	Rice	mitochondrion	16.67	5.16
Os07t0404300-01	Rice	nucleus	13.58	3.4
Os01t0815700-01	Rice	plastid	11.73	2.0

Protein Annotations

MapMan:16.10.2.3	MapMan:17.1.2.1.25	Gene3D:2.30.170.20	Gene3D:3.30.160.440	EntrezGene:4327483	EMBL:AK058612
EMBL:AK101927	ProteinID:BAD82702.1	ProteinID:BAF06529.1	ProteinID:BAS74917.1	ncoils:Coil	ProteinID:EEE55577.1
GO:GO:0000027	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0019538	GO:GO:0022625	GO:GO:0046872	GO:GO:1902626	InterPro:IPR038630
InterPro:L24e/L24_sf	EnsemblPlantsGene:Os01g0815800	EnsemblPlants:Os01t0815800-01	PFAM:PF01246	ScanProsite:PS01073	PANTHER:PTHR10792
PANTHER:PTHR10792:SF19	UniProt:Q5N754	InterPro:Ribosomal_L24e-rel	InterPro:Ribosomal_L24e_CS	SMART:SM00746	SUPFAM:SSF57716
InterPro:TRASH_dom	UniParc:UPI000049EAE9	RefSeq:XP_015620714.1	SEG:seg	:	:

Description

brassinosteroid receptor kinase (BRI1)-interacting protein 123, BRI1-interacting protein 123, brassinosteroid receptor kinase-interacting protein 123Similar to 60S ribosomal protein L24-A (L30A) (RP29) (YL21). (Os01t0815800-01);Non-protein coding transcript. (Os01t0815800-02)

Coordinates

chr1:+:34682524..34685373

Molecular Weight (calculated)

18454.7 Da

IEP (calculated)

11.483

GRAVY (calculated)

-1.058

Length

162 amino acids

Sequence
(BLAST)

001: MVLKTELCRF SGQKIYPGKG IRFIRADSQV FLFANSKCKR YFHNRLKPAK LTWTAMYRKQ HKKDIHAEAV KKRRRTTKKP YSRSIVGATL EVIQKKRSEK
101: PEVRDAAREA ALREIKERIK KTKDEKKAKK AEVAKSQKTQ SKGGATQRGA KGPKIGGGGG KR

Best Arabidopsis Sequence Match ( AT2G36620.1 )
(BLAST)

001: MVLKTELCRF SGQKIYPGRG IRFIRSDSQV FLFLNSKCKR YFHNKLKPSK LCWTAMYRKQ HKKDAAQEAV KRRRRATKKP YSRSIVGATL EVIQKKRAEK
101: PEVRDAAREA ALREIKERIK KTKDEKKAKK VEYASKQQKS QVKGNIPKSA APKAAKMGGG GGRR

Arabidopsis Description

RPL24A60S ribosomal protein L24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42347]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.