Factsheet for Os07t0404300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G359500.1	Wheat	mitochondrion	68.01	53.92
EER98389	Sorghum	mitochondrion, plastid	66.15	53.63
TraesCS6B01G392400.1	Wheat	mitochondrion	67.85	53.47
TraesCS6D01G342400.1	Wheat	mitochondrion	66.92	52.87
GSMUA_Achr11P...	Banana	mitochondrion	50.23	41.61
Solyc01g099230.2.1	Tomato	mitochondrion, plastid	42.97	35.5
VIT_14s0128g00850.t01	Wine grape	plastid	44.67	35.2
PGSC0003DMT400063483	Potato	mitochondrion, plastid	41.89	34.97
KRH68541	Soybean	nucleus	42.35	32.58
CDY41729	Canola	nucleus	41.27	32.25
Bra027952.1-P	Field mustard	nucleus	41.11	31.89
KRG96827	Soybean	nucleus	41.27	31.56
AT1G55040.1	Thale cress	nucleus, plastid	41.27	31.45
CDY53578	Canola	nucleus	40.03	31.17
Os03t0708900-01	Rice	nucleus	19.78	25.4
Os03t0712200-01	Rice	mitochondrion	18.24	22.56
Os01t0815800-01	Rice	nucleus	3.4	13.58
Os01t0815700-01	Rice	plastid	17.77	12.11

Protein Annotations

MapMan:16.12.5.3	Gene3D:4.10.1060.10	EntrezGene:4342984	ProteinID:BAC83661.1	ProteinID:BAD32097.1	ProteinID:BAF21341.1
ProteinID:BAT01086.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0007275
GO:GO:0008150	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0046872	GO:GO:0048046
InterPro:IPR001876	EnsemblPlantsGene:Os07g0404300	EnsemblPlants:Os07t0404300-01	PFAM:PF00641	ScanProsite:PS01358	PFscan:PS50199
PANTHER:PTHR23111	PANTHER:PTHR23111:SF29	UniProt:Q6Z647	SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI00001BF3E1
RefSeq:XP_015647751.1	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg	:	:

Description

Zinc finger, RanBP2-type domain containing protein. (Os07t0404300-01)

Coordinates

chr7:-:12313548..12325679

Molecular Weight (calculated)

73941.4 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.900

Length

647 amino acids

Sequence
(BLAST)

001: MSVAEVLRRE VELVHPWPEW IELMDRLAQQ KYFDLGGTGG ADEGCVAAAV PMDLAEVTQE TGFDFSRDWT TVKNACMNFG RDRFDIVKSL PRKDLQVLVG
101: HGCPSMDPKV VFSAKLIRKL VHLDEGDVCS SCNLRNLCSR GYILTRKEDE ARTLDVMRIL LFYGFDHVKE TVENKPLLKL KSVKTVVRKL IHDIAKLSAV
201: PIDPNLPPPI IRKPPPKVKQ PPPPPKKRVG RDDVEMKKGD WLCPKCDFMN FAKNTICLQC DAKRPKRQLL PGEWECPRCN FLNYRRNMSC FHCEHNRPPD
301: EYTNSQMEAN QSVPRKRLER PAHKSEVCNA WNFDFDDNES DGADVAAFEF ADSSKARNSL SVDNTSSRGG SKFSEDNEFG INETWREGTE RRFSERERVG
401: FDDFDDEEDD IDSYELDLSK GGQTDGMSRM SYLDFEDACD SADLNGRAKI RNSKHGEEED IIGSPEDEEF DHPSLRSSHL AASWRKPVSC NGSNNHRRES
501: FGSESDDGII SDLDGDINEG LKCKGGHNKH YPRRVVVRHN ELDDVPFSDM DCDIGGCVQS DRRNRFSTKF SDEFHARASN SNRKKMNERF KSSDMRDGHP
601: PFDRTRTRGT TELHDGSRDL QSNARRNWVK SGGFDDNNRP LRRLNRR

Best Arabidopsis Sequence Match ( AT1G55040.1 )
(BLAST)

001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER

Arabidopsis Description

Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.