Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68541 | Soybean | nucleus | 88.3 | 88.82 |
| VIT_14s0128g00850.t01 | Wine grape | plastid | 45.74 | 47.14 |
| PGSC0003DMT400063483 | Potato | mitochondrion, plastid | 42.08 | 45.94 |
| Solyc01g099230.2.1 | Tomato | mitochondrion, plastid | 41.84 | 45.21 |
| Bra027952.1-P | Field mustard | nucleus | 44.09 | 44.72 |
| CDY41729 | Canola | nucleus | 43.14 | 44.08 |
| CDY53578 | Canola | nucleus | 42.91 | 43.68 |
| AT1G55040.1 | Thale cress | nucleus, plastid | 43.03 | 42.87 |
| GSMUA_Achr11P... | Banana | mitochondrion | 38.89 | 42.13 |
| Os07t0404300-01 | Rice | nucleus | 31.56 | 41.27 |
| EER98389 | Sorghum | mitochondrion, plastid | 35.7 | 37.84 |
| TraesCS6A01G359500.1 | Wheat | mitochondrion | 35.93 | 37.25 |
| TraesCS6D01G342400.1 | Wheat | mitochondrion | 35.93 | 37.12 |
| TraesCS6B01G392400.1 | Wheat | mitochondrion | 35.58 | 36.66 |
| KRH70339 | Soybean | mitochondrion | 16.78 | 26.89 |
| KRH39085 | Soybean | plastid | 13.83 | 25.55 |
| KRH48632 | Soybean | mitochondrion, plastid | 13.83 | 25.32 |
| KRH33226 | Soybean | nucleus | 8.98 | 23.31 |
| KRH64967 | Soybean | plastid | 12.65 | 13.03 |
| KRG94930 | Soybean | mitochondrion, plastid, vacuole | 12.29 | 12.48 |
Protein Annotations
| EntrezGene:100807006 | MapMan:16.12.5.3 | Gene3D:4.10.1060.10 | EMBL:ACUP02012166 | EnsemblPlantsGene:GLYMA_19G234800 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | UniProt:I1NBZ0 | InterPro:IPR001876 | EnsemblPlants:KRG96827 | ProteinID:KRG96827 |
| ProteinID:KRG96827.1 | PFAM:PF00641 | ScanProsite:PS01358 | PFscan:PS50199 | PANTHER:PTHR23111 | PANTHER:PTHR23111:SF29 |
| SMART:SM00547 | SUPFAM:SSF90209 | UniParc:UPI000233E8BF | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:-:48458550..48463318
Molecular Weight (calculated)
96455.4 Da
IEP (calculated)
7.846
GRAVY (calculated)
-1.143
Length
846 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYGYGPFSL LLTRRLHLYS SLNPKPSFPL FHLLTKPFST APPDPNPKPS SLSARLSFVF DQIDAIEKER SQKHETLQRI RAWRESKNAP PSPSQNDAPP
101: EPALSVSADD ESPPEPPPNK AVELVHPWPE WIQLMEMLVH QNYFDHKRRD EDKMVHDLGF NSPEVAEGFD FTKDFKSVHM ACLYFGRDRF DILRSLSRKD
201: IQVLVGYGCP TVDRKVVFSA KLLRKHVHLD EGDVCSSCSL RNTCERGYLL TNKEDEAQTL DVMRLLLTFG FDPVDGSVIN KSLLKQKSVK TVVRKLLHEV
301: VKLSSVPIDP NLPPPVIKKP PPKVKQPPPP PKRRVGRDDV EMKKGDWLCP KCEFMNFAKN TVCLQCDAKR PKRQLLPGEW ECPECNFLNY RRNMVCFHCE
401: CKRPPDEFLE NKMQDRIQSS KPKLDKMGSR QEVSNAWNFD FDDNESDGAD VAAFEYADTH AIDENSDNHA QHANHTGWED DFEKNKVQGS PDGEYANPGL
501: YRPRTGFDDF EDEDDIDSYE LETAQNSSRM EESKYNFSEG ENFSESEDIE ATDDKMHARR KTASGRSAQS RSIRKNTSFS GSDDDELKFG TDEQLSVVSN
601: FKSGHVSAAD RKRKGRGPSK KLSFGSESEE EIGAGLYSDE DDDLNEEYSF RKNKGNKRDL SRQNKGNRHD SGRRNFTKDR KSGSIGGRQT NMFSDDFDGS
701: SQQSYRNSRG SRENDHNRKS FEDFDGPSRQ SYGDGRGSRG NNGNGSSRQS YGNGRGSRGN DRYRPRFEDF DGLSQRSYSD GRGSRGNKRK GSSRQSYGNG
801: RGSRGNDRNW QRFKDRENGT GRLNKYRMDE KDSGGEFKNS RRVIER
101: EPALSVSADD ESPPEPPPNK AVELVHPWPE WIQLMEMLVH QNYFDHKRRD EDKMVHDLGF NSPEVAEGFD FTKDFKSVHM ACLYFGRDRF DILRSLSRKD
201: IQVLVGYGCP TVDRKVVFSA KLLRKHVHLD EGDVCSSCSL RNTCERGYLL TNKEDEAQTL DVMRLLLTFG FDPVDGSVIN KSLLKQKSVK TVVRKLLHEV
301: VKLSSVPIDP NLPPPVIKKP PPKVKQPPPP PKRRVGRDDV EMKKGDWLCP KCEFMNFAKN TVCLQCDAKR PKRQLLPGEW ECPECNFLNY RRNMVCFHCE
401: CKRPPDEFLE NKMQDRIQSS KPKLDKMGSR QEVSNAWNFD FDDNESDGAD VAAFEYADTH AIDENSDNHA QHANHTGWED DFEKNKVQGS PDGEYANPGL
501: YRPRTGFDDF EDEDDIDSYE LETAQNSSRM EESKYNFSEG ENFSESEDIE ATDDKMHARR KTASGRSAQS RSIRKNTSFS GSDDDELKFG TDEQLSVVSN
601: FKSGHVSAAD RKRKGRGPSK KLSFGSESEE EIGAGLYSDE DDDLNEEYSF RKNKGNKRDL SRQNKGNRHD SGRRNFTKDR KSGSIGGRQT NMFSDDFDGS
701: SQQSYRNSRG SRENDHNRKS FEDFDGPSRQ SYGDGRGSRG NNGNGSSRQS YGNGRGSRGN DRYRPRFEDF DGLSQRSYSD GRGSRGNKRK GSSRQSYGNG
801: RGSRGNDRNW QRFKDRENGT GRLNKYRMDE KDSGGEFKNS RRVIER
001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
Arabidopsis Description
Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.