CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33226	Soybean	nucleus	44.13	71.47
VIT_01s0011g05660.t01	Wine grape	nucleus	39.96	47.74
GSMUA_AchrUn_...	Banana	nucleus	34.09	46.39
CDX96267	Canola	mitochondrion	38.26	43.44
CDY11563	Canola	mitochondrion	37.88	43.38
Bra016196.1-P	Field mustard	mitochondrion, nucleus	37.88	43.1
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	39.02	42.92
TraesCS4B01G046800.1	Wheat	mitochondrion	40.91	40.83
TraesCS4A01G267600.1	Wheat	mitochondrion	40.72	40.8
Solyc08g014510.2.1	Tomato	nucleus, plastid	36.93	40.62
TraesCS4D01G046600.1	Wheat	mitochondrion	40.34	40.26
HORVU4Hr1G007570.1	Barley	nucleus	24.62	40.0
Os03t0712200-01	Rice	mitochondrion	39.58	39.96
KXG37731	Sorghum	mitochondrion	39.02	39.16
Zm00001d013432_P001	Maize	mitochondrion	37.88	37.95
AT1G70650.2	Thale cress	nucleus	37.88	33.61
KRH39085	Soybean	plastid	25.19	29.04
KRH48632	Soybean	mitochondrion, plastid	25.19	28.79
KRG96827	Soybean	nucleus	26.89	16.78
KRH68541	Soybean	nucleus	26.33	16.53
KRH64967	Soybean	plastid	19.13	12.3
KRG94930	Soybean	mitochondrion, plastid, vacuole	18.37	11.64

Protein Annotations

EMBL:ACUP02000767	EnsemblPlants:KRH70339	EnsemblPlantsGene:GLYMA_02G084500	EntrezGene:100812864	Gene3D:4.10.1060.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001876	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111
PANTHER:PTHR23111:SF23	PFAM:PF00641	PFscan:PS50199	ProteinID:KRH70339	ProteinID:KRH70339.1	ScanProsite:PS01358
SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI000233757E	UniProt:K7K748	MapMan:16.12.5.3	:

Description

hypothetical protein

Coordinates

chr2:-:7358949..7361921

Molecular Weight (calculated)

61624.5 Da

IEP (calculated)

7.588

GRAVY (calculated)

-0.876

Length

528 amino acids

Sequence
(BLAST)

001: MLRNLWKRCC RPRLGPTTFL CSASPFHSAT FTLARRYFVS NEVEKDPGWR WRLEEEPSGF VDKEEEEQES ALQISHPWPE WLQLMKCLHD KGHFSHEERN
101: INAAMGAKDC NVVRTACLNF GRDHFHILRF LSRKDIGVTV ALGCPSLDRK VINSGKRLRA YIGIDEGNVC SSCNLRGDCE RAFVKAREDE GGRTVDIMRI
201: VLTYGLDPIN GSVENKPCLT KRVEESVRRL LKEIVEHSNK EENSNFPDST EVVTGHVHPN EQDKGKIDVS KMKQGDWLCP KCNFMNFARN IRCLRCDSFF
301: EERIKQLKED NNHMPLKKGD WICNKCNFLN FAKNTRCLQC KERPSNRQIN PGEWECDSCN YVNFRRNMVC LKCDHRRPIV SKASSFSFEP QPEDLDHYKN
401: SKFSFVARQG DRIDETPMVF ERKNRNRDSP KWRFVEDRNE NNKCLNKSND SSEFIDFPIV GGKTHLTKVQ RREAYKTELP NQCRRPSWQS ETENEFCSSD
501: NLSTDDEFCS VNNQSTDDEE MDEWFGKR

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.