CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016196.1-P	Field mustard	mitochondrion, nucleus	91.83	92.03
CDY11563	Canola	mitochondrion	82.58	83.3
AT1G70650.2	Thale cress	nucleus	67.1	52.44
VIT_01s0011g05660.t01	Wine grape	nucleus	40.22	42.31
GSMUA_AchrUn_...	Banana	nucleus	35.05	42.01
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	41.72	40.42
Solyc08g014510.2.1	Tomato	nucleus, plastid	40.43	39.17
KRH70339	Soybean	mitochondrion	43.44	38.26
Os03t0712200-01	Rice	mitochondrion	41.29	36.71
TraesCS4B01G046800.1	Wheat	mitochondrion	41.29	36.29
TraesCS4D01G046600.1	Wheat	mitochondrion	40.86	35.92
KRH33226	Soybean	nucleus	25.16	35.89
TraesCS4A01G267600.1	Wheat	mitochondrion	40.65	35.86
HORVU4Hr1G007570.1	Barley	nucleus	24.95	35.69
KXG37731	Sorghum	mitochondrion	39.57	34.98
Zm00001d013432_P001	Maize	mitochondrion	39.35	34.72
CDX93678	Canola	plastid	25.16	28.06
CDY40590	Canola	plastid	24.95	28.02
CDY53578	Canola	nucleus	26.67	14.92
CDY41729	Canola	nucleus	25.81	14.49
CDX78760	Canola	plastid, vacuole	19.57	12.98
CDX70775	Canola	plastid	18.92	12.74
CDY38459	Canola	plastid	19.14	12.43
CDY16887	Canola	plastid	18.28	11.86

Protein Annotations

EnsemblPlants:CDX96267	EnsemblPlantsGene:GSBRNA2T00102399001	Gene3D:4.10.1060.10	GO:A0A078E580	InterPro:IPR001876	InterPro:Znf_RanBP2
InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111	PANTHER:PTHR23111:SF23	PFAM:PF00641	PFscan:PS50199	ProteinID:CDX96267
ProteinID:CDX96267.1	ScanProsite:PS01358	SEG:seg	SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI0004EEBF30
MapMan:16.12.5.3	:	:	:	:	:

Description

BnaA07g28780D

Coordinates

chrLK031894:+:4714..7000

Molecular Weight (calculated)

53764.6 Da

IEP (calculated)

7.884

GRAVY (calculated)

-0.855

Length

465 amino acids

Sequence
(BLAST)

001: MMRFFKTRHY HGGYIRRTIL SPKPVNAVSQ HIHDLPQTQN PEIARSGLAD DPSSHPWPEW LDLMGMLVKK GYFGESVTSP KESNHIRTAC LDFARHRFTL
101: VRYLSKKDIK VIAGCGCPSI DRKVVNSGKR LRAYVGIDEV NVCGSCNLRG KCERAYAQAR DEEGARTIDV MRILLTYGLD SISPAVVNRA CQTKFVEDSV
201: RKLLRESVEY SLQDVECSAT VASRDELHPN SLENDERDPR KRPGDWHCTE CKFLNFAKNI RCLRCDVFSE ERLKQLKQEQ KDHLPLKKGD WICQTCNFLN
301: FAKNTGCLRC KDKPSMRQIN PGEWECESCY YINFRRNSVC LKCDHKRQKA PVVTPDSKSV GDHHSRVSKT WSFVKEEEEE EEEEGEEDGV MGFPVEGGRS
401: SVSRSVEKRE KWKLEMTQRM RSNGHEKKKD DDEERESRRC YDRRKIELLG NCSDDGEMDD WFSPT

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.