Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G046800.1 | Wheat | mitochondrion | 96.6 | 96.6 |
| TraesCS4A01G267600.1 | Wheat | mitochondrion | 95.27 | 95.64 |
| HORVU4Hr1G007570.1 | Barley | nucleus | 54.06 | 88.0 |
| KXG37731 | Sorghum | mitochondrion | 68.62 | 69.01 |
| Os03t0712200-01 | Rice | mitochondrion | 68.05 | 68.83 |
| Zm00001d013432_P001 | Maize | mitochondrion | 65.22 | 65.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.75 | 52.84 |
| VIT_01s0011g05660.t01 | Wine grape | nucleus | 35.54 | 42.53 |
| PGSC0003DMT400064951 | Potato | mitochondrion, nucleus | 38.0 | 41.88 |
| CDY11563 | Canola | mitochondrion | 35.73 | 41.0 |
| CDX96267 | Canola | mitochondrion | 35.92 | 40.86 |
| KRH70339 | Soybean | mitochondrion | 40.26 | 40.34 |
| Bra016196.1-P | Field mustard | mitochondrion, nucleus | 35.16 | 40.09 |
| Solyc08g014510.2.1 | Tomato | nucleus, plastid | 36.29 | 40.0 |
| KRH33226 | Soybean | nucleus | 22.12 | 35.89 |
| AT1G70650.2 | Thale cress | nucleus | 34.78 | 30.92 |
| TraesCS4D01G041700.1 | Wheat | mitochondrion, plastid | 27.6 | 25.26 |
| TraesCS6D01G342400.1 | Wheat | mitochondrion | 25.52 | 16.48 |
| TraesCS3D01G332700.1 | Wheat | plastid | 17.01 | 8.15 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G046600.1 | EnsemblPlantsGene:TraesCS4D01G046600 | Gene3D:4.10.1060.10 | InterPro:IPR001876 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf |
| ncoils:Coil | PANTHER:PTHR23111 | PANTHER:PTHR23111:SF23 | PFAM:PF00641 | PFscan:PS50199 | ScanProsite:PS01358 |
| SEG:seg | SMART:SM00547 | SUPFAM:SSF90209 | MapMan:16.12.5.3 | : | : |
Description
No Description!
Coordinates
chr4D:+:22022016..22025651
Molecular Weight (calculated)
59797.7 Da
IEP (calculated)
7.950
GRAVY (calculated)
-0.782
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRRLTAAAT ATALRRFCSH RPPPPPDRRL AFLRSELDDL DLSRAPAQPP PREQWQVTQE PGSGGARAGD KPVAVDIAHP WPEWVALMEL LLHKGHLDPS
101: AFAGAAPSKD SNLVRTACLR FGRERPEIVR YLSRWDIQVA LRGGCPSIDR KVINSGKRLR AHVGLDEGEV CSQCNLRGSC ERAYVRARKE EVGRTVDVMR
201: ILLTYGLDII TGNVGNKVCL NKTVKESIKK LLNEVVELDS KGPGSATDKA AQRMSKGQSA VPVKQGDWNC PKCNFLNFAK NIKCLRCDGE FQERYHLMHE
301: DQDHLPLKKG DWICKRCNFL NFAKNTRCLQ CHDKPTNRLL SPGEWECPSC NYLNFKRNAF CLKCGWKRPK ALNDQDTIEP HRDLEQNKHP AISFVQDGIQ
401: PTLRKRQLVQ KRAPLSDEDS DFWSSEEAGD DDDDGDENSM LPMHRDYKFL DGFPIVGGRT ATSQEPLERE KWKEEMSRGN QGLPGEASEE SNRSSPRVPR
501: SMEMLESEDD DDDISSWFSG ANSSRNLKK
101: AFAGAAPSKD SNLVRTACLR FGRERPEIVR YLSRWDIQVA LRGGCPSIDR KVINSGKRLR AHVGLDEGEV CSQCNLRGSC ERAYVRARKE EVGRTVDVMR
201: ILLTYGLDII TGNVGNKVCL NKTVKESIKK LLNEVVELDS KGPGSATDKA AQRMSKGQSA VPVKQGDWNC PKCNFLNFAK NIKCLRCDGE FQERYHLMHE
301: DQDHLPLKKG DWICKRCNFL NFAKNTRCLQ CHDKPTNRLL SPGEWECPSC NYLNFKRNAF CLKCGWKRPK ALNDQDTIEP HRDLEQNKHP AISFVQDGIQ
401: PTLRKRQLVQ KRAPLSDEDS DFWSSEEAGD DDDDGDENSM LPMHRDYKFL DGFPIVGGRT ATSQEPLERE KWKEEMSRGN QGLPGEASEE SNRSSPRVPR
501: SMEMLESEDD DDDISSWFSG ANSSRNLKK
001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
Arabidopsis Description
Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.