Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G269900.1 | Wheat | plastid | 95.16 | 94.99 |
| TraesCS4B01G044200.1 | Wheat | plastid | 92.91 | 92.75 |
| HORVU4Hr1G007170.4 | Barley | cytosol, nucleus | 79.24 | 92.34 |
| Os03t0708900-01 | Rice | nucleus | 51.21 | 58.73 |
| Zm00001d013449_P001 | Maize | mitochondrion | 44.64 | 50.0 |
| EER93589 | Sorghum | mitochondrion, plastid | 46.71 | 48.56 |
| GSMUA_Achr6P24110_001 | Banana | plastid | 35.47 | 48.12 |
| VIT_17s0000g02310.t01 | Wine grape | mitochondrion, plastid | 29.07 | 40.98 |
| Solyc03g118680.2.1 | Tomato | plastid | 28.2 | 40.05 |
| PGSC0003DMT400014472 | Potato | plastid | 27.85 | 39.56 |
| CDY40590 | Canola | plastid | 25.78 | 35.99 |
| Bra018736.1-P | Field mustard | plastid | 25.78 | 35.73 |
| CDX93678 | Canola | plastid | 25.43 | 35.25 |
| KRH39085 | Soybean | plastid | 27.34 | 34.5 |
| KRH48632 | Soybean | mitochondrion, plastid | 27.34 | 34.2 |
| AT1G48570.1 | Thale cress | plastid | 24.74 | 31.43 |
| TraesCS4D01G046600.1 | Wheat | mitochondrion | 25.26 | 27.6 |
| TraesCS6D01G342400.1 | Wheat | mitochondrion | 24.57 | 17.34 |
| TraesCS3D01G332700.1 | Wheat | plastid | 18.51 | 9.69 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G041700.1 | EnsemblPlantsGene:TraesCS4D01G041700 | Gene3D:4.10.1060.10 | InterPro:IPR001876 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf |
| PANTHER:PTHR23111 | PANTHER:PTHR23111:SF40 | PFAM:PF00641 | PFscan:PS50199 | ScanProsite:PS01358 | SEG:seg |
| SMART:SM00547 | SUPFAM:SSF90209 | MapMan:16.12.5.3 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:19546735..19551764
Molecular Weight (calculated)
63560.6 Da
IEP (calculated)
8.688
GRAVY (calculated)
-0.687
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MASCKLLTTA VSSSIRRFYR LASSPLLPPP ASRRLPVPLL SARFCSAAAA ATAPLDAAYS AVAVATAAAP APVDAASSAV AAVSEGHPWP EWADFLEKLR
101: AKGYFVRPPL ASGAPVGEEV AADAVGKPDY PFRDQNRVKN ACLNFARERF DLLSSLPKKD IQAIVECGCP NIFRKAVSSA KRLREFVQVD EGDACSVCKL
201: RGSCDKAYVI PKAEEAARTV DVVRILLTYA IDPATLSGEN SVGGGVQESA RKLLSDLTML CDTTIDPSLP KPVIHTYSKQ DSSTKPDKGK QSSRVSAGKG
301: RETAVTEMKK GDWLCPNCNF LNFARNRQCL ECKVDGPKKI EAATSEMKMG DWICPECAFM NFSRNKMCFK CEGQRPKRQL NPGEWECPSC DFVNFRRNQE
401: CKKCSHDRPE DDTQDNKLGY DVWRNTKGAG KDRSFDSVHQ GDDDGNEEGL PYKGEERRHV ASRRASPARR EFTGKSRNHG DEDNALPYEG GDRRVSSRRA
501: SPARKGFAKN DDGNEDVEFD VSPYDGERKH GSSRRAAPGR RGFTKDEDDV LPYEGARKHV VSRRATPSQR RFTAARGE
101: AKGYFVRPPL ASGAPVGEEV AADAVGKPDY PFRDQNRVKN ACLNFARERF DLLSSLPKKD IQAIVECGCP NIFRKAVSSA KRLREFVQVD EGDACSVCKL
201: RGSCDKAYVI PKAEEAARTV DVVRILLTYA IDPATLSGEN SVGGGVQESA RKLLSDLTML CDTTIDPSLP KPVIHTYSKQ DSSTKPDKGK QSSRVSAGKG
301: RETAVTEMKK GDWLCPNCNF LNFARNRQCL ECKVDGPKKI EAATSEMKMG DWICPECAFM NFSRNKMCFK CEGQRPKRQL NPGEWECPSC DFVNFRRNQE
401: CKKCSHDRPE DDTQDNKLGY DVWRNTKGAG KDRSFDSVHQ GDDDGNEEGL PYKGEERRHV ASRRASPARR EFTGKSRNHG DEDNALPYEG GDRRVSSRRA
501: SPARKGFAKN DDGNEDVEFD VSPYDGERKH GSSRRAAPGR RGFTKDEDDV LPYEGARKHV VSRRATPSQR RFTAARGE
001: MSSSRIFLVG NSIFRPHKPS FPLSFNRFPS VSLRFRCFSS DAAAAVATTV DSDSPSLTPH PWPEWITFVD RLKTKGYFTK DTEDDTVYQE MILVKDACLS
101: FARDRYDVLR SLSSGDVQAL VERGCPNLFR KTVNSSKRIR AHVKLNEGDV CGSCDLRSSC DRAYVILKDT EADARTVDVM RLLLFNALDS IVISRGEVPP
201: GKELVHESAR RLLLELVEFS EKPLIPALPK PSSKESSLPS KERAFKSRND EPSQRVAFKS RNDDPSQRVA FKSRNDEPSH RVAFKSRNDE SSQRDRPLYS
301: ADWACPKCDF VNFARNERCR ECNEVADRRP VAAVVKEGDW LCPECSFLNF TRNQSCLKCK AKGPKKTSMV NIVEMKKGDW NCTGCGYMNF ASNKQCRECR
401: EQRHKTLAEP GDWECPSCDF VNFRRNDACK KCECKRPSQA NNDQEDHTWK RPALV
101: FARDRYDVLR SLSSGDVQAL VERGCPNLFR KTVNSSKRIR AHVKLNEGDV CGSCDLRSSC DRAYVILKDT EADARTVDVM RLLLFNALDS IVISRGEVPP
201: GKELVHESAR RLLLELVEFS EKPLIPALPK PSSKESSLPS KERAFKSRND EPSQRVAFKS RNDDPSQRVA FKSRNDEPSH RVAFKSRNDE SSQRDRPLYS
301: ADWACPKCDF VNFARNERCR ECNEVADRRP VAAVVKEGDW LCPECSFLNF TRNQSCLKCK AKGPKKTSMV NIVEMKKGDW NCTGCGYMNF ASNKQCRECR
401: EQRHKTLAEP GDWECPSCDF VNFRRNDACK KCECKRPSQA NNDQEDHTWK RPALV
Arabidopsis Description
T1N15.19 [Source:UniProtKB/TrEMBL;Acc:Q9LP67]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.