CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018736.1-P	Field mustard	plastid	99.04	99.04
CDY40590	Canola	plastid	91.37	92.03
AT1G48570.1	Thale cress	plastid	79.38	72.75
VIT_17s0000g02310.t01	Wine grape	mitochondrion, plastid	49.4	50.24
Solyc03g118680.2.1	Tomato	plastid	39.33	40.29
KRH39085	Soybean	plastid	44.12	40.17
PGSC0003DMT400014472	Potato	plastid	38.61	39.56
KRH48632	Soybean	mitochondrion, plastid	43.17	38.96
GSMUA_Achr6P24110_001	Banana	plastid	36.93	36.15
Os03t0708900-01	Rice	nucleus	33.81	27.98
HORVU4Hr1G007170.4	Barley	cytosol, nucleus	33.09	27.82
Zm00001d013449_P001	Maize	mitochondrion	33.81	27.33
TraesCS4A01G269900.1	Wheat	plastid	35.49	25.56
TraesCS4D01G041700.1	Wheat	mitochondrion, plastid	35.25	25.43
TraesCS4B01G044200.1	Wheat	plastid	35.25	25.39
EER93589	Sorghum	mitochondrion, plastid	33.57	25.18
CDY11563	Canola	mitochondrion	27.82	25.16
CDX96267	Canola	mitochondrion	28.06	25.16
CDY41729	Canola	nucleus	27.34	13.77
CDY53578	Canola	nucleus	27.34	13.72
CDX78760	Canola	plastid, vacuole	23.02	13.69
CDX70775	Canola	plastid	22.06	13.31
CDY38459	Canola	plastid	22.54	13.13
CDY16887	Canola	plastid	21.82	12.69

Protein Annotations

EnsemblPlants:CDX93678	EnsemblPlantsGene:GSBRNA2T00156366001	Gene3D:4.10.1060.10	GO:A0A078E2F7	InterPro:IPR001876	InterPro:Znf_RanBP2
InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111	PANTHER:PTHR23111:SF40	PFAM:PF00641	PFscan:PS50199	ProteinID:CDX93678
ProteinID:CDX93678.1	ScanProsite:PS01358	SEG:seg	SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI0004EDAE1C
MapMan:16.12.5.3	:	:	:	:	:

Description

BnaA06g03700D

Coordinates

chrLK031876:-:1285990..1288668

Molecular Weight (calculated)

47372.2 Da

IEP (calculated)

8.556

GRAVY (calculated)

-0.627

Length

417 amino acids

Sequence
(BLAST)

001: MSSSRIFLVG NSIFRPQNPS SFPLSLNRFP SVSLRLRCFS NATATAAASP TVESDSPSSP SPHPWPEWIN FVDRLKTKGY FTKNIEDDTV YQEMNVVKDA
101: CLSFARDRYD VLRSLSSSDV QALVERGCPN LFRKTVNSSK RIRAHVKLDE GDVCGSCELR SSCDRAYVIL KDTEADARTV DVMRLLLFNA LDSVVVSRGE
201: VPPGKELVHE SARRLLLELL ELSEKPVNLV LPKPAAKVAL PPKERVFKSR SDEPSQRVRS QYNADWACPK CDFLNFARNE RCRECNEVAD RRSVAAVVKE
301: GDWLCPECNF SNFSRNQSCL KCKAKGPKRS SMENIEMKKG DWNCSGCGFM NFSSNKKCKQ CREQRPPRQL EPGEWECPSC DFLNYRRNTV CKKCECKRPS
401: ESNNHEDDHS WKRPALL

Best Arabidopsis Sequence Match ( AT1G48570.1 )
(BLAST)

001: MSSSRIFLVG NSIFRPHKPS FPLSFNRFPS VSLRFRCFSS DAAAAVATTV DSDSPSLTPH PWPEWITFVD RLKTKGYFTK DTEDDTVYQE MILVKDACLS
101: FARDRYDVLR SLSSGDVQAL VERGCPNLFR KTVNSSKRIR AHVKLNEGDV CGSCDLRSSC DRAYVILKDT EADARTVDVM RLLLFNALDS IVISRGEVPP
201: GKELVHESAR RLLLELVEFS EKPLIPALPK PSSKESSLPS KERAFKSRND EPSQRVAFKS RNDDPSQRVA FKSRNDEPSH RVAFKSRNDE SSQRDRPLYS
301: ADWACPKCDF VNFARNERCR ECNEVADRRP VAAVVKEGDW LCPECSFLNF TRNQSCLKCK AKGPKKTSMV NIVEMKKGDW NCTGCGYMNF ASNKQCRECR
401: EQRHKTLAEP GDWECPSCDF VNFRRNDACK KCECKRPSQA NNDQEDHTWK RPALV

Arabidopsis Description

T1N15.19 [Source:UniProtKB/TrEMBL;Acc:Q9LP67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.