Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G041700.1 | Wheat | mitochondrion, plastid | 94.99 | 95.16 |
| HORVU4Hr1G007170.4 | Barley | cytosol, nucleus | 78.93 | 92.14 |
| TraesCS4B01G044200.1 | Wheat | plastid | 91.54 | 91.54 |
| Os03t0708900-01 | Rice | nucleus | 51.99 | 59.72 |
| Zm00001d013449_P001 | Maize | mitochondrion | 45.08 | 50.58 |
| EER93589 | Sorghum | mitochondrion, plastid | 47.32 | 49.28 |
| GSMUA_Achr6P24110_001 | Banana | plastid | 35.58 | 48.36 |
| Solyc03g118680.2.1 | Tomato | plastid | 28.5 | 40.54 |
| VIT_17s0000g02310.t01 | Wine grape | mitochondrion, plastid | 28.5 | 40.24 |
| PGSC0003DMT400014472 | Potato | plastid | 27.81 | 39.56 |
| Bra018736.1-P | Field mustard | plastid | 25.91 | 35.97 |
| CDY40590 | Canola | plastid | 25.56 | 35.75 |
| CDX93678 | Canola | plastid | 25.56 | 35.49 |
| KRH48632 | Soybean | mitochondrion, plastid | 27.29 | 34.2 |
| KRH39085 | Soybean | plastid | 26.94 | 34.06 |
| AT1G48570.1 | Thale cress | plastid | 24.87 | 31.65 |
| TraesCS4A01G267600.1 | Wheat | mitochondrion | 23.83 | 26.19 |
| TraesCS6A01G359500.1 | Wheat | mitochondrion | 23.66 | 16.79 |
| TraesCS3A01G339100.1 | Wheat | nucleus | 17.79 | 9.34 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G269900.1 | EnsemblPlantsGene:TraesCS4A01G269900 | Gene3D:4.10.1060.10 | InterPro:IPR001876 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf |
| PANTHER:PTHR23111 | PANTHER:PTHR23111:SF40 | PFAM:PF00641 | PFscan:PS50199 | ScanProsite:PS01358 | SEG:seg |
| SMART:SM00547 | SUPFAM:SSF90209 | MapMan:16.12.5.3 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:581331452..581336479
Molecular Weight (calculated)
63570.7 Da
IEP (calculated)
8.882
GRAVY (calculated)
-0.686
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKLLTTA VSSSIRRFYR LASSPLLPPP ASRRLPVPLL SARFCSAATA AAPAPVDAAY SAVAAATAAA PAPVDAAYSA VAAVSEGHPW PEWADFLEKL
101: RAKGYFVRPP LASGAPVGEE VAADAVGKPD YPFRDQNRVK NACLNFARER FDLLSSLPKK DIQAIVECGC PNIFRKAVSS AKRLREFVQV DEGDACSVCK
201: LRGSCDKAYV IPKAEEAART VDVVRILLTY AIDPATLSGE NSVGGGVQES ARKLLSDMTM LCDTTIDPSL PKPVIHTYSK QDSSTKPDKG KQSSRVSAGK
301: GRETAVTEMK KGDWLCSNCN FLNFARNRQC LECKVDGPKK IEAATSEMKM GDWICPGCAF MNFSRNKMCF KCEGQRPKRQ LNPGEWECPS CDFVNFRRNQ
401: ECKKCSHDRP EDDTQDNKLG YDVWRNTKGA GKDRSFDSVH QGDDDGDEEG LPYKGEDRRH VASRRASPAR REFAGKSRNH GDEDNALPYE GGDRRVSSRR
501: ASPARKGFAK NDGGDKDVEF DVSPYDGERK HGSSRRVAPG RRGFTKDEDD VLPYEGARKH MVSRRATPSQ RRFTAARGE
101: RAKGYFVRPP LASGAPVGEE VAADAVGKPD YPFRDQNRVK NACLNFARER FDLLSSLPKK DIQAIVECGC PNIFRKAVSS AKRLREFVQV DEGDACSVCK
201: LRGSCDKAYV IPKAEEAART VDVVRILLTY AIDPATLSGE NSVGGGVQES ARKLLSDMTM LCDTTIDPSL PKPVIHTYSK QDSSTKPDKG KQSSRVSAGK
301: GRETAVTEMK KGDWLCSNCN FLNFARNRQC LECKVDGPKK IEAATSEMKM GDWICPGCAF MNFSRNKMCF KCEGQRPKRQ LNPGEWECPS CDFVNFRRNQ
401: ECKKCSHDRP EDDTQDNKLG YDVWRNTKGA GKDRSFDSVH QGDDDGDEEG LPYKGEDRRH VASRRASPAR REFAGKSRNH GDEDNALPYE GGDRRVSSRR
501: ASPARKGFAK NDGGDKDVEF DVSPYDGERK HGSSRRVAPG RRGFTKDEDD VLPYEGARKH MVSRRATPSQ RRFTAARGE
001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
Arabidopsis Description
Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.