CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
nucleus 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39085	Soybean	plastid	80.74	81.44
VIT_17s0000g02310.t01	Wine grape	mitochondrion, plastid	44.59	50.24
Solyc03g118680.2.1	Tomato	plastid	38.31	43.49
Bra018736.1-P	Field mustard	plastid	39.18	43.41
CDY40590	Canola	plastid	38.74	43.24
CDX93678	Canola	plastid	38.96	43.17
PGSC0003DMT400014472	Potato	plastid	37.45	42.51
AT1G48570.1	Thale cress	plastid	39.61	40.22
GSMUA_Achr6P24110_001	Banana	plastid	34.85	37.79
Os03t0708900-01	Rice	nucleus	33.98	31.15
HORVU4Hr1G007170.4	Barley	cytosol, nucleus	32.25	30.04
Zm00001d013449_P001	Maize	mitochondrion	31.6	28.29
TraesCS4D01G041700.1	Wheat	mitochondrion, plastid	34.2	27.34
TraesCS4A01G269900.1	Wheat	plastid	34.2	27.29
TraesCS4B01G044200.1	Wheat	plastid	33.98	27.12
EER93589	Sorghum	mitochondrion, plastid	31.17	25.9
KRH70339	Soybean	mitochondrion	28.79	25.19
KRH33226	Soybean	nucleus	15.37	21.78
KRG96827	Soybean	nucleus	25.32	13.83
KRH68541	Soybean	nucleus	24.89	13.67
KRH64967	Soybean	plastid	24.03	13.52
KRG94930	Soybean	mitochondrion, plastid, vacuole	23.81	13.21

Protein Annotations

EntrezGene:100819532	MapMan:16.12.5.3	Gene3D:4.10.1060.10	EMBL:ACUP02004257	EnsemblPlantsGene:GLYMA_07G102100	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001876	UniProt:K7L0U0	EnsemblPlants:KRH48632	ProteinID:KRH48632
ProteinID:KRH48632.1	PFAM:PF00641	ScanProsite:PS01358	PFscan:PS50199	PANTHER:PTHR23111	PANTHER:PTHR23111:SF40
SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI00023387CB	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:9728404..9733917

Molecular Weight (calculated)

51861.7 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.504

Length

462 amino acids

Sequence
(BLAST)

001: MSSSKLTLYG IGTALFRTRR TAPVTVTPHS PFLFFKPIPF PPCFLRPDSS SSSSFSAAAA AAAETLPSVD HPWPEWVSFV DRLNTKGYLP KTSSSDDTVS
101: LYANMNSLKD ACLSFARDRY DLFNLLPTND IQAVVEGGCP NLLRKAVNSA KRLRAHLQLD EGDVCGACYL RSSCDRAYVI LKDFETDART VDIVRILLFY
201: ALDPLVLSGG DKPPGREVIE SSVRKLLSQL IELSESPAPA PAPARSKPTA QDGVVEGQSL SVTTNQLFKD VEMKKGDWMC PKCNFMNFSR NTQCLNCKED
301: KPKDINPFTV QMKPGDWTCP ECNYLNFARN RLCLECKIEG PAKEANTIEV ERKKGDWTCP QCGFMNYARN TKCLRCPETR PKKHPGDWNC PGCGFMNFAS
401: KMKCLHCQEP NPSSKKYSGD WSCPKCDFYN YARNMACLKC NAERPKEQPT VDYEDHEWRR SN

Best Arabidopsis Sequence Match ( AT1G48570.1 )
(BLAST)

001: MSSSRIFLVG NSIFRPHKPS FPLSFNRFPS VSLRFRCFSS DAAAAVATTV DSDSPSLTPH PWPEWITFVD RLKTKGYFTK DTEDDTVYQE MILVKDACLS
101: FARDRYDVLR SLSSGDVQAL VERGCPNLFR KTVNSSKRIR AHVKLNEGDV CGSCDLRSSC DRAYVILKDT EADARTVDVM RLLLFNALDS IVISRGEVPP
201: GKELVHESAR RLLLELVEFS EKPLIPALPK PSSKESSLPS KERAFKSRND EPSQRVAFKS RNDDPSQRVA FKSRNDEPSH RVAFKSRNDE SSQRDRPLYS
301: ADWACPKCDF VNFARNERCR ECNEVADRRP VAAVVKEGDW LCPECSFLNF TRNQSCLKCK AKGPKKTSMV NIVEMKKGDW NCTGCGYMNF ASNKQCRECR
401: EQRHKTLAEP GDWECPSCDF VNFRRNDACK KCECKRPSQA NNDQEDHTWK RPALV

Arabidopsis Description

T1N15.19 [Source:UniProtKB/TrEMBL;Acc:Q9LP67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.