CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 3
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48632	Soybean	mitochondrion, plastid	81.44	80.74
VIT_17s0000g02310.t01	Wine grape	mitochondrion, plastid	45.63	50.98
PGSC0003DMT400014472	Potato	plastid	39.74	44.72
Bra018736.1-P	Field mustard	plastid	40.61	44.6
Solyc03g118680.2.1	Tomato	plastid	39.52	44.47
CDY40590	Canola	plastid	40.17	44.44
CDX93678	Canola	plastid	40.17	44.12
AT1G48570.1	Thale cress	plastid	41.05	41.32
GSMUA_Achr6P24110_001	Banana	plastid	35.81	38.5
Os03t0708900-01	Rice	nucleus	34.72	31.55
HORVU4Hr1G007170.4	Barley	cytosol, nucleus	32.75	30.24
Zm00001d013449_P001	Maize	mitochondrion	31.66	28.1
TraesCS4D01G041700.1	Wheat	mitochondrion, plastid	34.5	27.34
TraesCS4A01G269900.1	Wheat	plastid	34.06	26.94
TraesCS4B01G044200.1	Wheat	plastid	33.84	26.77
KRH70339	Soybean	mitochondrion	29.04	25.19
EER93589	Sorghum	mitochondrion, plastid	30.57	25.18
KRH33226	Soybean	nucleus	15.94	22.39
KRG96827	Soybean	nucleus	25.55	13.83
KRH68541	Soybean	nucleus	25.33	13.79
KRH64967	Soybean	plastid	24.02	13.4
KRG94930	Soybean	mitochondrion, plastid, vacuole	23.14	12.73

Protein Annotations

EntrezGene:100811037	MapMan:16.12.5.3	Gene3D:4.10.1060.10	EMBL:ACUP02005913	EnsemblPlantsGene:GLYMA_09G177100	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	UniProt:I1L464	InterPro:IPR001876	EnsemblPlants:KRH39085	ProteinID:KRH39085
ProteinID:KRH39085.1	PFAM:PF00641	ScanProsite:PS01358	PFscan:PS50199	PANTHER:PTHR23111	PANTHER:PTHR23111:SF40
SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI0002338D26	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:40142934..40148069

Molecular Weight (calculated)

51383.2 Da

IEP (calculated)

8.543

GRAVY (calculated)

-0.575

Length

458 amino acids

Sequence
(BLAST)

001: MSSASKLTLY GIGTALFRTR RTAPVSVTPF LFFKPIPLPR PPRFLLLRDS SSSSAAAAEI LPSVDHPWPE WVSFVDRLST KGYLPKPSSS SDDTVSLYTN
101: MNSLKDACLS FSRDRYDLFK LLPTHDIQAV VEGGCPNLLR KAVNSAKRLR AHLQLDEGDV CGACNLRSSC DRAYVILKDF ETDARTIDIV RILLFYALDP
201: LVLSGGDKPP GREVIESSAR KLLSQLIELS ESPAPAPASA RSKPTAQDAV GEGQSLSVTT NQLFKDAEMK KGDWMCPKCN FMNFSRNTQC LNCNEDRHKD
301: INPSTVQMKP GDWTCPECNF LNFARNTRCL KCKTAGPTKE ANTNEVERKK GDWTCPQCGF MNYARNTKCL RCPETRPKKH PGDWNCPGCG FMNFGSKMKC
401: LHCQEPNPSS KKYNGDWSCP KCDFYNYARN MACLKCNTER PKEQPTVDYD GHEWRRSN

Best Arabidopsis Sequence Match ( AT1G48570.1 )
(BLAST)

001: MSSSRIFLVG NSIFRPHKPS FPLSFNRFPS VSLRFRCFSS DAAAAVATTV DSDSPSLTPH PWPEWITFVD RLKTKGYFTK DTEDDTVYQE MILVKDACLS
101: FARDRYDVLR SLSSGDVQAL VERGCPNLFR KTVNSSKRIR AHVKLNEGDV CGSCDLRSSC DRAYVILKDT EADARTVDVM RLLLFNALDS IVISRGEVPP
201: GKELVHESAR RLLLELVEFS EKPLIPALPK PSSKESSLPS KERAFKSRND EPSQRVAFKS RNDDPSQRVA FKSRNDEPSH RVAFKSRNDE SSQRDRPLYS
301: ADWACPKCDF VNFARNERCR ECNEVADRRP VAAVVKEGDW LCPECSFLNF TRNQSCLKCK AKGPKKTSMV NIVEMKKGDW NCTGCGYMNF ASNKQCRECR
401: EQRHKTLAEP GDWECPSCDF VNFRRNDACK KCECKRPSQA NNDQEDHTWK RPALV

Arabidopsis Description

T1N15.19 [Source:UniProtKB/TrEMBL;Acc:Q9LP67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.