CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70339	Soybean	mitochondrion	71.47	44.13
HORVU4Hr1G007570.1	Barley	nucleus	34.05	34.15
GSMUA_AchrUn_...	Banana	nucleus	35.28	29.64
VIT_01s0011g05660.t01	Wine grape	nucleus	38.96	28.73
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	37.12	25.21
CDY11563	Canola	mitochondrion	35.58	25.16
CDX96267	Canola	mitochondrion	35.89	25.16
Bra016196.1-P	Field mustard	mitochondrion, nucleus	35.28	24.78
Solyc08g014510.2.1	Tomato	nucleus, plastid	35.89	24.38
Os03t0712200-01	Rice	mitochondrion	36.81	22.94
TraesCS4B01G046800.1	Wheat	mitochondrion	36.5	22.5
TraesCS4A01G267600.1	Wheat	mitochondrion	36.2	22.39
KXG37731	Sorghum	mitochondrion	35.89	22.24
TraesCS4D01G046600.1	Wheat	mitochondrion	35.89	22.12
Zm00001d013432_P001	Maize	mitochondrion	35.58	22.01
AT1G70650.2	Thale cress	nucleus	34.36	18.82
KRH39085	Soybean	plastid	22.39	15.94
KRH48632	Soybean	mitochondrion, plastid	21.78	15.37
KRG96827	Soybean	nucleus	23.31	8.98
KRH68541	Soybean	nucleus	21.78	8.44
KRH64967	Soybean	plastid	19.94	7.92
KRG94930	Soybean	mitochondrion, plastid, vacuole	19.94	7.8

Protein Annotations

MapMan:16.12.5.3	Gene3D:4.10.1060.10	UniProt:A0A0R0HRU5	EMBL:ACUP02006419	EnsemblPlantsGene:GLYMA_10G108500	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001876	EnsemblPlants:KRH33226	ProteinID:KRH33226	ProteinID:KRH33226.1
PFAM:PF00641	ScanProsite:PS01358	PFscan:PS50199	PANTHER:PTHR23111	PANTHER:PTHR23111:SF23	SMART:SM00547
SUPFAM:SSF90209	UniParc:UPI0006EDDCA6	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	:	:

Description

hypothetical protein

Coordinates

chr10:+:24673676..24675390

Molecular Weight (calculated)

38035.7 Da

IEP (calculated)

7.836

GRAVY (calculated)

-0.854

Length

326 amino acids

Sequence
(BLAST)

001: MNGNQHRYNP LLISSEIEQW KAREDEGGQT VDIMRIILTY GLDPINGSVE NKPCLTKRVE ESGRRLLKEI VEHSNKAENS NFPDSTEVVT GHQGDWLCPN
101: FSCTCLCFHF QFSLARCNFM NFTRNIRCLR CDSFFEERIN QLKEDNNHLP LKKGDWICNK CNFLNFAKNT RCLQCKERTS NRQINPGEWC IYINFRRNMV
201: FLKCDHRRLI VSKASSSSLQ PQPEDIDHDK NSKFAFCLNK SNNPSEFIDF PIVGGKTHLT KVQRREAYKT ELPNQCKRPS WQSETDDKFC SSNNLSTDNE
301: FCSVNNQSTN DEEMDEWFGK KGKHRN

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.