CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013432_P001	Maize	mitochondrion	89.54	89.37
TraesCS4D01G046600.1	Wheat	mitochondrion	69.01	68.62
TraesCS4A01G267600.1	Wheat	mitochondrion	68.63	68.5
TraesCS4B01G046800.1	Wheat	mitochondrion	68.63	68.24
Os03t0712200-01	Rice	mitochondrion	67.11	67.5
HORVU4Hr1G007570.1	Barley	nucleus	40.87	66.15
GSMUA_AchrUn_...	Banana	nucleus	38.02	51.55
VIT_01s0011g05660.t01	Wine grape	nucleus	36.31	43.21
CDY11563	Canola	mitochondrion	36.31	41.43
Bra016196.1-P	Field mustard	mitochondrion, nucleus	35.36	40.09
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	36.5	40.0
Solyc08g014510.2.1	Tomato	nucleus, plastid	36.5	40.0
CDX96267	Canola	mitochondrion	34.98	39.57
KRH70339	Soybean	mitochondrion	39.16	39.02
KRH33226	Soybean	nucleus	22.24	35.89
AT1G70650.2	Thale cress	nucleus	35.17	31.09
EER93589	Sorghum	mitochondrion, plastid	24.71	23.38
EER98389	Sorghum	mitochondrion, plastid	24.14	15.91
EES01648	Sorghum	plastid	16.92	9.9

Protein Annotations

EnsemblPlants:KXG37731	EnsemblPlantsGene:SORBI_3001G116800	Gene3D:4.10.1060.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR001876	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111	PANTHER:PTHR23111:SF23	PFAM:PF00641
PFscan:PS50199	ProteinID:KXG37731	ProteinID:KXG37731.1	ScanProsite:PS01358	SEG:seg	SMART:SM00547
SUPFAM:SSF90209	UniParc:UPI0003C69CEC	UniProt:A0A1B6QIJ2	MapMan:16.12.5.3	:	:

Description

hypothetical protein

Coordinates

chr1:-:9111033..9114655

Molecular Weight (calculated)

59535.4 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.732

Length

526 amino acids

Sequence
(BLAST)

001: MHRRLATAAA APALRRFSHH SAPPRPDPRL AFLRSEVDDL DLSPSHKPSP RPPHREECQV LEELRSGLAR AGDAPAAVDI AHPWPEWVAL MELLLRRGHV
101: DPSAFASASL SSKDANAVRT ACLQFGRQRP ELIRHISRWN IQVAMRCGCP SIDRKVVNSG KRLRAYVGLD EGEVCSQCNL RGSCDRAYVK ARKEEVGRTV
201: DVMRILLTYG LDVITGNVEN RACLNKTVKE SIKILLNEVV EVDSRGPGSS TVKAAQRKGQ SAVPMKQGDW NCPKCDFLNF AKNIKCLRCD GEFQERYQLL
301: HEDQEHLPLK KGDWICKRCN FLNFAKNTRC LQCHEKPTNR LLNPGEWECV SCNYVNFKRN GFCLKCGWKR PKSLNNQDTI ESRHDLEHSK TPSISFVQDG
401: VQLKRWQSPQ KSASPSDEDS DFWSADDEGG DSRDNDALLQ QKDYRFLDSF PIVGGRTANS QDRLAREKWK DEMSRRNKGL QTKESQESVR PCSPGRLPRS
501: MELVESDDDI ASWFSGGNNI RNLDKT

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.