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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 5
  • cytosol 1
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400064951 Potato mitochondrion, nucleus 78.33 78.33
VIT_01s0011g05660.t01 Wine grape nucleus 43.12 46.83
GSMUA_AchrUn_... Banana nucleus 36.46 45.1
CDY11563 Canola mitochondrion 39.58 41.21
Bra016196.1-P Field mustard mitochondrion, nucleus 39.58 40.95
CDX96267 Canola mitochondrion 39.17 40.43
Os03t0712200-01 Rice mitochondrion 41.04 37.67
KRH70339 Soybean mitochondrion 40.62 36.93
TraesCS4B01G046800.1 Wheat mitochondrion 40.42 36.67
KXG37731 Sorghum mitochondrion 40.0 36.5
TraesCS4D01G046600.1 Wheat mitochondrion 40.0 36.29
TraesCS4A01G267600.1 Wheat mitochondrion 39.79 36.24
Zm00001d013432_P001 Maize mitochondrion 39.58 36.05
KRH33226 Soybean nucleus 24.38 35.89
HORVU4Hr1G007570.1 Barley nucleus 24.17 35.69
Solyc03g118680.2.1 Tomato plastid 27.5 32.43
AT1G70650.2 Thale cress nucleus 38.12 30.76
Solyc01g099230.2.1 Tomato mitochondrion, plastid 25.0 15.33
Solyc01g057780.2.1 Tomato mitochondrion, plastid 18.75 10.3
Protein Annotations
EnsemblPlants:Solyc08g014510.2.1EnsemblPlantsGene:Solyc08g014510.2Gene3D:4.10.1060.10InterPro:IPR001876InterPro:Multihaem_cyt_sfInterPro:Znf_RanBP2
ncoils:CoilPANTHER:PTHR23111PANTHER:PTHR23111:SF23PFAM:PF00641PFscan:PS50199ScanProsite:PS01358
SEG:segSMART:SM00547SUPFAM:SSF48695UniParc:UPI000276B2A3UniProt:K4CJ82MapMan:16.12.5.3
Description
No Description!
Coordinates
chr8:-:4645215..4647952
Molecular Weight (calculated)
55098.2 Da
IEP (calculated)
8.154
GRAVY (calculated)
-0.756
Length
480 amino acids
Sequence
(BLAST)
001: MLKMIFASSN KIIQNSSISI SISISNFHTK NSAIQFVLEE GKTLQSQQTT KQNEEVEFSR KPNSGIQTPQ LWPEWVNLMD KLLKMGCFDG FGNPFGNAQW
101: DANLIRTACL NFARHRFDLI RYLSPQDIEV LASCGCPSMD RKVVNSGKRL RLLFGIEEGN VCSFCILRGS CERAYAVPHK DQGGRTVDVM RLLLTYGLNP
201: ITGAVENKPS LNKRVEESAR KLLKEIVNFS SEELFCETKK STNPWNPSVQ RDHEEGQINA LRKHGDWVCP ECNFLNFSRN AKCLRCNGLN HERLNKLRQE
301: QDHLPLKKGD WICSKCHFMN FAKNTRCLQC TEKPPKRHLN PGEWECESCN YINFKRNTVC LKCDHRRPKA SSCAGSSCGS ANQSRTISRT RPYFGELNEE
401: TDEEWQLIES EREDRLSSMP ENEVVDFPVL GGNSELSRDA KKQERWKTGN KRENGDELNK KYFQNSGNEE MDEWFGHKNV
Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)
001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
Arabidopsis Description
Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.