Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400064951 | Potato | mitochondrion, nucleus | 78.33 | 78.33 |
VIT_01s0011g05660.t01 | Wine grape | nucleus | 43.12 | 46.83 |
GSMUA_AchrUn_... | Banana | nucleus | 36.46 | 45.1 |
CDY11563 | Canola | mitochondrion | 39.58 | 41.21 |
Bra016196.1-P | Field mustard | mitochondrion, nucleus | 39.58 | 40.95 |
CDX96267 | Canola | mitochondrion | 39.17 | 40.43 |
Os03t0712200-01 | Rice | mitochondrion | 41.04 | 37.67 |
KRH70339 | Soybean | mitochondrion | 40.62 | 36.93 |
TraesCS4B01G046800.1 | Wheat | mitochondrion | 40.42 | 36.67 |
KXG37731 | Sorghum | mitochondrion | 40.0 | 36.5 |
TraesCS4D01G046600.1 | Wheat | mitochondrion | 40.0 | 36.29 |
TraesCS4A01G267600.1 | Wheat | mitochondrion | 39.79 | 36.24 |
Zm00001d013432_P001 | Maize | mitochondrion | 39.58 | 36.05 |
KRH33226 | Soybean | nucleus | 24.38 | 35.89 |
HORVU4Hr1G007570.1 | Barley | nucleus | 24.17 | 35.69 |
Solyc03g118680.2.1 | Tomato | plastid | 27.5 | 32.43 |
AT1G70650.2 | Thale cress | nucleus | 38.12 | 30.76 |
Solyc01g099230.2.1 | Tomato | mitochondrion, plastid | 25.0 | 15.33 |
Solyc01g057780.2.1 | Tomato | mitochondrion, plastid | 18.75 | 10.3 |
Protein Annotations
EnsemblPlants:Solyc08g014510.2.1 | EnsemblPlantsGene:Solyc08g014510.2 | Gene3D:4.10.1060.10 | InterPro:IPR001876 | InterPro:Multihaem_cyt_sf | InterPro:Znf_RanBP2 |
ncoils:Coil | PANTHER:PTHR23111 | PANTHER:PTHR23111:SF23 | PFAM:PF00641 | PFscan:PS50199 | ScanProsite:PS01358 |
SEG:seg | SMART:SM00547 | SUPFAM:SSF48695 | UniParc:UPI000276B2A3 | UniProt:K4CJ82 | MapMan:16.12.5.3 |
Description
No Description!
Coordinates
chr8:-:4645215..4647952
Molecular Weight (calculated)
55098.2 Da
IEP (calculated)
8.154
GRAVY (calculated)
-0.756
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKMIFASSN KIIQNSSISI SISISNFHTK NSAIQFVLEE GKTLQSQQTT KQNEEVEFSR KPNSGIQTPQ LWPEWVNLMD KLLKMGCFDG FGNPFGNAQW
101: DANLIRTACL NFARHRFDLI RYLSPQDIEV LASCGCPSMD RKVVNSGKRL RLLFGIEEGN VCSFCILRGS CERAYAVPHK DQGGRTVDVM RLLLTYGLNP
201: ITGAVENKPS LNKRVEESAR KLLKEIVNFS SEELFCETKK STNPWNPSVQ RDHEEGQINA LRKHGDWVCP ECNFLNFSRN AKCLRCNGLN HERLNKLRQE
301: QDHLPLKKGD WICSKCHFMN FAKNTRCLQC TEKPPKRHLN PGEWECESCN YINFKRNTVC LKCDHRRPKA SSCAGSSCGS ANQSRTISRT RPYFGELNEE
401: TDEEWQLIES EREDRLSSMP ENEVVDFPVL GGNSELSRDA KKQERWKTGN KRENGDELNK KYFQNSGNEE MDEWFGHKNV
101: DANLIRTACL NFARHRFDLI RYLSPQDIEV LASCGCPSMD RKVVNSGKRL RLLFGIEEGN VCSFCILRGS CERAYAVPHK DQGGRTVDVM RLLLTYGLNP
201: ITGAVENKPS LNKRVEESAR KLLKEIVNFS SEELFCETKK STNPWNPSVQ RDHEEGQINA LRKHGDWVCP ECNFLNFSRN AKCLRCNGLN HERLNKLRQE
301: QDHLPLKKGD WICSKCHFMN FAKNTRCLQC TEKPPKRHLN PGEWECESCN YINFKRNTVC LKCDHRRPKA SSCAGSSCGS ANQSRTISRT RPYFGELNEE
401: TDEEWQLIES EREDRLSSMP ENEVVDFPVL GGNSELSRDA KKQERWKTGN KRENGDELNK KYFQNSGNEE MDEWFGHKNV
001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
Arabidopsis Description
Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.