Factsheet for HORVU4Hr1G007570.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G267600.1	Wheat	mitochondrion	89.23	55.03
TraesCS4B01G046800.1	Wheat	mitochondrion	89.54	55.01
TraesCS4D01G046600.1	Wheat	mitochondrion	88.0	54.06
Os03t0712200-01	Rice	mitochondrion	71.08	44.17
KXG37731	Sorghum	mitochondrion	66.15	40.87
Zm00001d013432_P001	Maize	mitochondrion	64.62	39.85
GSMUA_AchrUn_...	Banana	nucleus	45.85	38.4
KRH33226	Soybean	nucleus	34.15	34.05
VIT_01s0011g05660.t01	Wine grape	nucleus	39.08	28.73
CDY11563	Canola	mitochondrion	36.31	25.6
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	37.23	25.21
CDX96267	Canola	mitochondrion	35.69	24.95
KRH70339	Soybean	mitochondrion	40.0	24.62
Bra016196.1-P	Field mustard	mitochondrion, nucleus	34.77	24.35
Solyc08g014510.2.1	Tomato	nucleus, plastid	35.69	24.17
AT1G70650.2	Thale cress	nucleus	34.46	18.82
HORVU4Hr1G007170.4	Barley	cytosol, nucleus	23.38	15.32
HORVU3Hr1G080150.3	Barley	mitochondrion, nucleus, plastid	16.92	5.01

Protein Annotations

EnsemblPlants:HORVU4Hr1G007570.1	EnsemblPlantsGene:HORVU4Hr1G007570	Gene3D:4.10.1060.10	InterPro:IPR001876	InterPro:Multihaem_cyt_sf	InterPro:Znf_RanBP2
PANTHER:PTHR23111	PANTHER:PTHR23111:SF23	PFAM:PF00641	PFscan:PS50199	ScanProsite:PS01358	SEG:seg
SMART:SM00547	SUPFAM:SSF48695	UniParc:UPI0002966072	UniProt:M0XLH8	MapMan:16.12.5.3	:

Description

No Description!

Coordinates

chrchr4H:-:19939727..19943322

Molecular Weight (calculated)

37357.1 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.946

Length

325 amino acids

Sequence
(BLAST)

001: MRILLTYGLD IITGNMGNKA CLTKTVKESI KKLLNEVVEL DSKGPGSTTD KAAVRMSKPM KQGDWNCPKC NFLNFAKNIK CLRCDGEFQE RYHLMHEDQD
101: HLPLKKGDWI CKRCNFLNFA KNTRCLQCHD KPTNRLLSPG EWECASCNYL NFKRNAFCLK CGWKRPKALN DQDTVEPHRD LEQNKHPTIS FVQDGIQPTL
201: RKRQLVQKRA PLSDEDSDFW SSEEEGHDNS ENNSMLPMHR DYKFLDSFPI AGGRTAISQE PLEREKWKEE MSRGNQGLPR EATEGSNRSS VRVPRSMEMA
301: ESDDDDDEIS SWFSGGNSNR NLKKS

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.