Factsheet for GSMUA_AchrUn_randomP07090_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G007570.1	Barley	nucleus	38.4	45.85
VIT_01s0011g05660.t01	Wine grape	nucleus	49.48	43.44
Os03t0712200-01	Rice	mitochondrion	54.12	40.15
TraesCS4A01G267600.1	Wheat	mitochondrion	53.35	39.28
TraesCS4B01G046800.1	Wheat	mitochondrion	53.09	38.94
TraesCS4D01G046600.1	Wheat	mitochondrion	52.84	38.75
KXG37731	Sorghum	mitochondrion	51.55	38.02
Zm00001d013432_P001	Maize	mitochondrion	51.03	37.57
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	46.13	37.29
Solyc08g014510.2.1	Tomato	nucleus, plastid	45.1	36.46
KRH33226	Soybean	nucleus	29.64	35.28
CDX96267	Canola	mitochondrion	42.01	35.05
CDY11563	Canola	mitochondrion	40.98	34.49
KRH70339	Soybean	mitochondrion	46.39	34.09
Bra016196.1-P	Field mustard	mitochondrion, nucleus	40.72	34.05
AT1G70650.2	Thale cress	nucleus	40.98	26.72
GSMUA_Achr6P24110_001	Banana	plastid	28.09	25.59
GSMUA_Achr11P...	Banana	mitochondrion	25.77	12.8
GSMUA_Achr7P02560_001	Banana	plastid, vacuole	17.78	9.6
GSMUA_Achr7P21740_001	Banana	nucleus	17.78	6.14

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP07090_001	EnsemblPlants:GSMUA_AchrUn_randomT07090_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG07090_001	Gene3D:4.10.1060.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR001876	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111	PANTHER:PTHR23111:SF23
PFAM:PF00641	PFscan:PS50199	ScanProsite:PS01358	SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI00029597FA
UniProt:M0U720	MapMan:16.12.5.3	:	:	:	:

Description

zinc finger family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07090_001]

Coordinates

chrchrUn_random:-:31493542..31495586

Molecular Weight (calculated)

44480.8 Da

IEP (calculated)

8.314

GRAVY (calculated)

-0.719

Length

388 amino acids

Sequence
(BLAST)

001: MRLGPCRAGE ILMLWRDIHI IGQCGCPSKD RKVVNSGKRL RAHVGIQEGD VCSSCSLRVS CERAYVKARE DEVGRTVDVM RILLTYGLDI ITGSVENSAC
101: LNKTIKESVK KLLNEMVEFS SKELDVNSLT LTSKRPLHRQ SKANGHQLFK GQLSVPTKQG DWICPKCNFL NFAKNITCLR CNGQFQERFK MLQLQEEHGH
201: LPLKKGDWIC QKCNFLNFAK NIECLQCHEK PHNRQLNPGE WECISCNYIN FRKNSVCLRC DWKRPKAINN GDFKVVTQKE DSDFWRSSED ECSDYGDNRF
301: NSWKGFNNFP IIGGRTAVSQ DATVRQRWKE KMSRRHRDPS GECVEESDHD VPSTPSSDMD LDNCSSEDDT AEWFGSGKLS HRFHKSSR

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.