Factsheet for Bra016196.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96267	Canola	mitochondrion	92.03	91.83
AT1G70650.2	Thale cress	nucleus	65.09	50.76
VIT_01s0011g05660.t01	Wine grape	nucleus	40.3	42.31
GSMUA_AchrUn_...	Banana	nucleus	34.05	40.72
Solyc08g014510.2.1	Tomato	nucleus, plastid	40.95	39.58
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	40.52	39.17
KRH70339	Soybean	mitochondrion	43.1	37.88
Os03t0712200-01	Rice	mitochondrion	40.95	36.33
KXG37731	Sorghum	mitochondrion	40.09	35.36
TraesCS4B01G046800.1	Wheat	mitochondrion	40.3	35.35
KRH33226	Soybean	nucleus	24.78	35.28
TraesCS4D01G046600.1	Wheat	mitochondrion	40.09	35.16
TraesCS4A01G267600.1	Wheat	mitochondrion	39.87	35.1
Zm00001d013432_P001	Maize	mitochondrion	39.66	34.91
HORVU4Hr1G007570.1	Barley	nucleus	24.35	34.77
Bra018736.1-P	Field mustard	plastid	25.43	28.3
Bra027952.1-P	Field mustard	nucleus	25.65	14.27
Bra002106.1-P	Field mustard	plastid	19.4	12.57
Bra006420.1-P	Field mustard	plastid, vacuole	19.18	12.43

Protein Annotations

EnsemblPlants:Bra016196.1	EnsemblPlants:Bra016196.1-P	EnsemblPlantsGene:Bra016196	Gene3D:4.10.1060.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR001876	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111	PANTHER:PTHR23111:SF23
PFAM:PF00641	PFscan:PS50199	ScanProsite:PS01358	SEG:seg	SMART:SM00547	SUPFAM:SSF90209
UniParc:UPI00025412C0	UniProt:M4DI69	MapMan:16.12.5.3	:	:	:

Description

AT1G70650 (E=5e-185) | zinc finger (Ran-binding) family protein

Coordinates

chrA07:+:18928711..18930832

Molecular Weight (calculated)

53885.7 Da

IEP (calculated)

7.885

GRAVY (calculated)

-0.880

Length

464 amino acids

Sequence
(BLAST)

001: MRFFKTRHYH GGYIRRTILS PKPLNAVSQH IHDLAQTQSP EIPRSRLVDD PSSHPWPEWL DLMGMLVKKG YFGESVTSPK ESNHIRTACL DFARHRFTLV
101: RYLSKKDMKV IAGCGCPSID RKVVNSGKRL RAYVGIDEVN VCGSCNLRGK CERAYAQARD EEGARTIDVM RILLTYGLDS ISPAVVNRAC QTKFVEDSVR
201: KLLRESVEYS LQDVECSETV ASRDELHPNS LENDERDPRK RPGDWHCTEC KFLNFAKNIR CFRCDVFSEE RLKQLKQEQK DHLPLKKGDW ICQTCNFLNF
301: AKNTGCLRCK DKPSMRQINP GEWECESCYY INFRRNSVCL KCDHKRQKAP VVTPDSKSVG DHHSRVSKTW SFVKEEEEEE EEEGEEDGVM GFPVEGGRSS
401: VSRSVEKREK WKLEMTQRMR SNGHEKKKDD DEERESRRCY DRRRIELLGN CSDDGEMDDW FSPT

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.