Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53578 | Canola | nucleus | 90.53 | 90.85 |
| AT1G55040.1 | Thale cress | nucleus, plastid | 74.1 | 72.79 |
| KRG96827 | Soybean | nucleus | 44.72 | 44.09 |
| VIT_14s0128g00850.t01 | Wine grape | plastid | 42.69 | 43.36 |
| PGSC0003DMT400063483 | Potato | mitochondrion, plastid | 39.57 | 42.58 |
| KRH68541 | Soybean | nucleus | 42.81 | 42.45 |
| Solyc01g099230.2.1 | Tomato | mitochondrion, plastid | 39.33 | 41.89 |
| Os07t0404300-01 | Rice | nucleus | 31.89 | 41.11 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.77 | 40.33 |
| TraesCS6D01G342400.1 | Wheat | mitochondrion | 37.77 | 38.46 |
| TraesCS6A01G359500.1 | Wheat | mitochondrion | 37.53 | 38.36 |
| TraesCS6B01G392400.1 | Wheat | mitochondrion | 37.41 | 38.0 |
| EER98389 | Sorghum | mitochondrion, plastid | 35.25 | 36.84 |
| Bra018736.1-P | Field mustard | plastid | 14.03 | 28.06 |
| Bra016196.1-P | Field mustard | mitochondrion, nucleus | 14.27 | 25.65 |
| Bra006420.1-P | Field mustard | plastid, vacuole | 14.51 | 16.9 |
| Bra002106.1-P | Field mustard | plastid | 13.43 | 15.64 |
Protein Annotations
| MapMan:16.12.5.3 | Gene3D:4.10.1060.10 | EnsemblPlantsGene:Bra027952 | EnsemblPlants:Bra027952.1 | EnsemblPlants:Bra027952.1-P | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009793 | GO:GO:0046872 | GO:GO:0048046 | InterPro:IPR001876 | UniProt:M4EGN8 |
| PFAM:PF00641 | ScanProsite:PS01358 | PFscan:PS50199 | PANTHER:PTHR23111 | PANTHER:PTHR23111:SF29 | SMART:SM00547 |
| SUPFAM:SSF90209 | UniParc:UPI0002542223 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg | : |
Description
AT1G55040 (E=1e-231) | zinc finger (Ran-binding) family protein
Coordinates
chrA09:-:10075856..10079183
Molecular Weight (calculated)
92913.1 Da
IEP (calculated)
6.590
GRAVY (calculated)
-1.051
Length
834 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPSISLLLI KRISLLNINP KSRRLFHPFL AKALSTSAQS NPNNSSSPEE NHKPSSSLSS RLSFVFDQID AIEKRHSEQD ETLERIRAWR QSKQQPPPPP
101: PPPPALRRDP DPEKSESESV GDNERPEEDL TQSVLSKENG VVELVHPWPE WMELMEVLVK QNYFDLRRQR DDDDEDEMMV HSLGIDVSPS SSSNVGAALL
201: QDFRAVQNAC VNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTLDL MKILFTYGFD
301: PLNDTVVTNK SLLKKKSVKT VVRKLLHEVV KLSKVPIDPN LTPPVIKKAP PKVKQPPPPP KRRVGRDDVE MKKGDWLCPK CDFMNFAKNT ICLQCDAKRP
401: KRQLLPGEWE CPECNFLNYR RNMACFHCDC KRPPDAFLEN KTQETHRFTE SQSEKVVKRD DVSNAWNFDF DDDESDGAEV AAFEYADSSR KNQNLPMDGL
501: RDPEEEEFGN LPPGARESSE IGGRSRRPGV GFDDFDDEDD VDSYEIDETG NREAPARTSF ASEEFSEDEQ FPESKAGYNA HRGGSNRNGN SRGGFSRDNE
601: LGFSSDDEAS VTPRWKSSHV ASTNRGPPSR KLTFGSDDEF GLDSDMEDDG PRSGLRGGGG QRSNGARGGF KGKRRSYSAS ESDDDDMDDK EYRGSSFSGN
701: RSRGGNRGRM RGGRGGFNDY NASSGFSDNR SRGRGGRTGG GRRGGFDSDG EDYRGSGRSR GNREDRGGFG ERMGSRSGGF DDGFDRKSSR GGRGAGSFRG
801: SNRGGGGRGN RHGNSDGKDT DSADFRNSRR VIER
101: PPPPALRRDP DPEKSESESV GDNERPEEDL TQSVLSKENG VVELVHPWPE WMELMEVLVK QNYFDLRRQR DDDDEDEMMV HSLGIDVSPS SSSNVGAALL
201: QDFRAVQNAC VNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTLDL MKILFTYGFD
301: PLNDTVVTNK SLLKKKSVKT VVRKLLHEVV KLSKVPIDPN LTPPVIKKAP PKVKQPPPPP KRRVGRDDVE MKKGDWLCPK CDFMNFAKNT ICLQCDAKRP
401: KRQLLPGEWE CPECNFLNYR RNMACFHCDC KRPPDAFLEN KTQETHRFTE SQSEKVVKRD DVSNAWNFDF DDDESDGAEV AAFEYADSSR KNQNLPMDGL
501: RDPEEEEFGN LPPGARESSE IGGRSRRPGV GFDDFDDEDD VDSYEIDETG NREAPARTSF ASEEFSEDEQ FPESKAGYNA HRGGSNRNGN SRGGFSRDNE
601: LGFSSDDEAS VTPRWKSSHV ASTNRGPPSR KLTFGSDDEF GLDSDMEDDG PRSGLRGGGG QRSNGARGGF KGKRRSYSAS ESDDDDMDDK EYRGSSFSGN
701: RSRGGNRGRM RGGRGGFNDY NASSGFSDNR SRGRGGRTGG GRRGGFDSDG EDYRGSGRSR GNREDRGGFG ERMGSRSGGF DDGFDRKSSR GGRGAGSFRG
801: SNRGGGGRGN RHGNSDGKDT DSADFRNSRR VIER
001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
Arabidopsis Description
Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.