Factsheet for VIT_14s0128g00850.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099230.2.1	Tomato	mitochondrion, plastid	47.87	50.19
PGSC0003DMT400063483	Potato	mitochondrion, plastid	47.14	49.94
KRH68541	Soybean	nucleus	47.62	46.49
KRG96827	Soybean	nucleus	47.14	45.74
Os07t0404300-01	Rice	nucleus	35.2	44.67
CDY41729	Canola	nucleus	44.21	43.84
AT1G55040.1	Thale cress	nucleus, plastid	44.95	43.46
GSMUA_Achr11P...	Banana	mitochondrion	40.8	42.89
Bra027952.1-P	Field mustard	nucleus	43.36	42.69
CDY53578	Canola	nucleus	43.12	42.6
TraesCS6A01G359500.1	Wheat	mitochondrion	39.83	40.07
TraesCS6B01G392400.1	Wheat	mitochondrion	39.71	39.71
TraesCS6D01G342400.1	Wheat	mitochondrion	39.22	39.32
EER98389	Sorghum	mitochondrion, plastid	37.15	38.22
VIT_17s0000g02310.t01	Wine grape	mitochondrion, plastid	15.47	30.98
VIT_01s0011g05660.t01	Wine grape	nucleus	14.13	26.24
VIT_08s0056g01170.t01	Wine grape	endoplasmic reticulum, plastid	14.37	13.42

Protein Annotations

EntrezGene:100263126	wikigene:100263126	EntrezGene:104881408	MapMan:16.12.5.3	Gene3D:4.10.1060.10	ProteinID:CCB59929
ProteinID:CCB59929.1	ncoils:Coil	UniProt:F6HZ14	EMBL:FN596501	GO:GO:0000003	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005739	GO:GO:0007275	GO:GO:0008150	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0046872	GO:GO:0048046	InterPro:IPR001876	EntrezGene:LOC100263126	wikigene:LOC100263126
PFAM:PF00641	ScanProsite:PS01358	PFscan:PS50199	PANTHER:PTHR23111	PANTHER:PTHR23111:SF29	SMART:SM00547
SUPFAM:SSF90209	UniParc:UPI00015C991B	ArrayExpress:VIT_14s0128g00850	EnsemblPlantsGene:VIT_14s0128g00850	EnsemblPlants:VIT_14s0128g00850.t01	unigene:Vvi.22206
RefSeq:XP_002280635	RefSeq:XP_002280635.2	RefSeq:XP_010659864.1	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	SEG:seg

Description

No Description!

Coordinates

chr14:+:3369488..3376804

Molecular Weight (calculated)

93467.9 Da

IEP (calculated)

6.684

GRAVY (calculated)

-1.101

Length

821 amino acids

Sequence
(BLAST)

001: MAQNLNTLLP LLRRLSSQNP NPNLTFSLFL SHLLSRPFST IPSATPATTP STTKPSSLSS RLSFVFDQID QIEKERQSFE QKDQVLQRIR AWRESKPSTD
101: STADPDEEHK PEPQNERREL GGGVVELAHP WKEWVELMER LVQQNYFDHR RKDEDGLVES LGFGDVKEVV DDFGFDFTRD WKTVQTACLN FGRDRFDILR
201: SLSRQDIQIL VGYGCPSEDR KLVFSAKLLR KLVHLDEGDV CSSCSLRSSC EKAYLLTNKE DEARTIDVMR VLLTFGFDPV NGLVTNKSLM KQKSVKNVVR
301: KLLHEVVKLS AVPIDPNLPP PVIKRAPPKV KQPPPPPKKR VGRDDIEMKK GDWLCPKCDF MNFAKNTVCL QCDAKRPKRQ LLPGEWECPD CNFLNYRRNM
401: ACFHCEHKRP PDEFMENQRQ ERERGPRTRL EKVASRAGVP NAWNFNFDDD ESDGADVAAF EYADSPRMGQ DAPLDDRAQG ENFRGPDDDF NKGSRLPGGH
501: KREYQDPDVS RPRMGFDDFD DEDDDVDNYE LETSSSNPAQ KTSSIDFSEL EEYSGSEDIE GFDENFPGRH QTKSSKYNKS SRPIHRKAAL SGIEDDELDL
601: DSDEELSVNP KWKSSHVADS RQRGRGATGP SRGLSFGSDE ELGLGSGTDD DLGEDFGSQS KRNKLGSGRR DRWRGGSDTE DGHFSESNDD DPRSYRSRAN
701: KAAPGRRQNN SRGRGDFDFT HDSKFRSNSA RGGRRNSFND DFNRSSPGSR GGKNRGGFRG NDYDGPRMSN RAGNFRDFNG PRRGQRFGSG RGGRDKDFNN
801: RSDKNWDFDH DRPRRQRIIE R

Best Arabidopsis Sequence Match ( AT1G55040.1 )
(BLAST)

001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER

Arabidopsis Description

Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.