Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027952.1-P | Field mustard | nucleus | 90.85 | 90.53 |
| CDY41729 | Canola | nucleus | 86.64 | 86.96 |
| AT1G55040.1 | Thale cress | nucleus, plastid | 71.48 | 69.96 |
| VIT_14s0128g00850.t01 | Wine grape | plastid | 42.6 | 43.12 |
| KRG96827 | Soybean | nucleus | 43.68 | 42.91 |
| PGSC0003DMT400063483 | Potato | mitochondrion, plastid | 38.75 | 41.55 |
| KRH68541 | Soybean | nucleus | 42.0 | 41.5 |
| Solyc01g099230.2.1 | Tomato | mitochondrion, plastid | 38.51 | 40.87 |
| Os07t0404300-01 | Rice | nucleus | 31.17 | 40.03 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.55 | 39.95 |
| TraesCS6A01G359500.1 | Wheat | mitochondrion | 35.98 | 36.64 |
| TraesCS6D01G342400.1 | Wheat | mitochondrion | 36.1 | 36.63 |
| TraesCS6B01G392400.1 | Wheat | mitochondrion | 35.74 | 36.18 |
| EER98389 | Sorghum | mitochondrion, plastid | 34.3 | 35.71 |
| CDY40590 | Canola | plastid | 14.08 | 28.26 |
| CDX93678 | Canola | plastid | 13.72 | 27.34 |
| CDY11563 | Canola | mitochondrion | 14.92 | 26.9 |
| CDX96267 | Canola | mitochondrion | 14.92 | 26.67 |
| CDX70775 | Canola | plastid | 14.2 | 17.08 |
| CDX78760 | Canola | plastid, vacuole | 14.08 | 16.69 |
| CDY16887 | Canola | plastid | 13.6 | 15.76 |
| CDY38459 | Canola | plastid | 13.0 | 15.08 |
Protein Annotations
| EnsemblPlants:CDY53578 | EnsemblPlantsGene:GSBRNA2T00011012001 | Gene3D:4.10.1060.10 | GO:A0A078IX47 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR001876 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | PANTHER:PTHR23111 | PANTHER:PTHR23111:SF29 |
| PFAM:PF00641 | PFscan:PS50199 | ProteinID:CDY53578 | ProteinID:CDY53578.1 | ScanProsite:PS01358 | SEG:seg |
| SMART:SM00547 | SUPFAM:SSF90209 | UniParc:UPI0004EED9A6 | UniProt:A0A078IX47 | MapMan:16.12.5.3 | : |
Description
BnaC09g51570DBnaC09g51570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IX47]
Coordinates
chrLK033216:-:60135..63427
Molecular Weight (calculated)
92517.6 Da
IEP (calculated)
7.121
GRAVY (calculated)
-1.041
Length
831 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPSISLLLI KRISLRNINP KSRRLFHPFL VKPLSTSAQS NPNNSSSPEE NHKPSSSLSS RLSFVFDQID AIEKRHSEQD ETLERIRAWR QSKQQPPPPA
101: AALRRDPDPE KSESESVGDN ERPEELTQSV LSKENGVVEL VHPWPEWMEL MEVLVKQNYF DHRRQRDDDE DEMMVQSLGI DVPSSSSSSS NVGAALFQDF
201: RAVQNACVNF GKDRFDILRS LSRNDIQILV GHGCPATDRK VVFSGKLLRK RVHLDEGDVC SSCSLRNSCE KAFLLTNKED EARTLDLMKI LFTYGFDPLS
301: DTVVANKSLL KKKSVKTVVR KLLHEVVKLS KVPIDPNLTP PVIKKAPPKV KQPPPPPKRR VGRDDVEMKK GDWLCPKCDF MNFAKNTICL QCDAKRPKRQ
401: LLPGEWECPE CNFLNYRRNM ACFHCDCKRP PDAFLENKTQ ETHRFTEGQT EKVVKRDDVS NAWNFDFDDD ESDGAEVAAF EYADSSRKNK NLPMDGLRDP
501: EEEEFGNLPP GARESSEIGG TSRRPGVGFD DFDDEDDVDS YEIDETGNRE VPSRTSFASE EFSEDEQFPE SKAGYNAHRG GSNRNGNSRG GFSRDNELGF
601: SSDDEASVTP RWKSSHVAST NRGPPSRKLT FGSDDEFGLD SDMEDDGPRS GLRGGGGQRS NGARGGFKGK RRSYSASESD DDDMDDKEYR GSSFSGNRSR
701: GGNRGRMRGG RGGFNDYNAS SGFSDNRSRG RGGRTGGGRR GGFDSDGEDY RGSGRSRGNR EERGGFGGRM GSRSGGFDDG FDRKSSRGGR GAGSFRGSNR
801: GGGGRGNRHG NSDGKDTDSA DFRNSRRVIE R
101: AALRRDPDPE KSESESVGDN ERPEELTQSV LSKENGVVEL VHPWPEWMEL MEVLVKQNYF DHRRQRDDDE DEMMVQSLGI DVPSSSSSSS NVGAALFQDF
201: RAVQNACVNF GKDRFDILRS LSRNDIQILV GHGCPATDRK VVFSGKLLRK RVHLDEGDVC SSCSLRNSCE KAFLLTNKED EARTLDLMKI LFTYGFDPLS
301: DTVVANKSLL KKKSVKTVVR KLLHEVVKLS KVPIDPNLTP PVIKKAPPKV KQPPPPPKRR VGRDDVEMKK GDWLCPKCDF MNFAKNTICL QCDAKRPKRQ
401: LLPGEWECPE CNFLNYRRNM ACFHCDCKRP PDAFLENKTQ ETHRFTEGQT EKVVKRDDVS NAWNFDFDDD ESDGAEVAAF EYADSSRKNK NLPMDGLRDP
501: EEEEFGNLPP GARESSEIGG TSRRPGVGFD DFDDEDDVDS YEIDETGNRE VPSRTSFASE EFSEDEQFPE SKAGYNAHRG GSNRNGNSRG GFSRDNELGF
601: SSDDEASVTP RWKSSHVAST NRGPPSRKLT FGSDDEFGLD SDMEDDGPRS GLRGGGGQRS NGARGGFKGK RRSYSASESD DDDMDDKEYR GSSFSGNRSR
701: GGNRGRMRGG RGGFNDYNAS SGFSDNRSRG RGGRTGGGRR GGFDSDGEDY RGSGRSRGNR EERGGFGGRM GSRSGGFDDG FDRKSSRGGR GAGSFRGSNR
801: GGGGRGNRHG NSDGKDTDSA DFRNSRRVIE R
001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
Arabidopsis Description
Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.