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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 4
  • cytosol 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0404300-01 Rice nucleus 53.63 66.15
TraesCS6D01G342400.1 Wheat mitochondrion 65.54 63.86
TraesCS6A01G359500.1 Wheat mitochondrion 63.41 62.01
TraesCS6B01G392400.1 Wheat mitochondrion 63.16 61.39
GSMUA_Achr11P... Banana mitochondrion 44.74 45.71
PGSC0003DMT400063483 Potato mitochondrion, plastid 38.35 39.48
Solyc01g099230.2.1 Tomato mitochondrion, plastid 37.84 38.57
VIT_14s0128g00850.t01 Wine grape plastid 38.22 37.15
KRG96827 Soybean nucleus 37.84 35.7
KRH68541 Soybean nucleus 37.47 35.55
Bra027952.1-P Field mustard nucleus 36.84 35.25
CDY41729 Canola nucleus 35.71 34.42
CDY53578 Canola nucleus 35.71 34.3
AT1G55040.1 Thale cress nucleus, plastid 35.96 33.8
KXG37731 Sorghum mitochondrion 15.91 24.14
EER93589 Sorghum mitochondrion, plastid 16.04 23.02
EES01648 Sorghum plastid 15.66 13.9
Protein Annotations
MapMan:16.12.5.3Gene3D:4.10.1060.10EntrezGene:8057319UniProt:C5X4A0EnsemblPlants:EER98389ProteinID:EER98389
ProteinID:EER98389.1GO:GO:0000003GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005739GO:GO:0007275
GO:GO:0008150GO:GO:0009790GO:GO:0009791GO:GO:0009793GO:GO:0046872GO:GO:0048046
InterPro:IPR001876PFAM:PF00641ScanProsite:PS01358PFscan:PS50199PANTHER:PTHR23111PANTHER:PTHR23111:SF29
SMART:SM00547EnsemblPlantsGene:SORBI_3002G112600SUPFAM:SSF90209UniParc:UPI0001A8401CRefSeq:XP_002461868.1InterPro:Znf_RanBP2
InterPro:Znf_RanBP2_sfSEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:13721445..13728535
Molecular Weight (calculated)
90112.4 Da
IEP (calculated)
6.299
GRAVY (calculated)
-0.939
Length
798 amino acids
Sequence
(BLAST)
001: MAYHSPLLLL RRRRGIPTPS SLLVLLRHRP FASSPSPPPP PSSASSKPPA LSARLSFVFD QLDALDRSRS SELSARDAAL RRIQSWRRPA PPPPEAPSLD
101: AEPGPEPEPE PGPGPDGQKE AAPAAASADE VARMSMEEVL RREVELVHPW PEWIELMERL AQQRYFDLGR ACGADESSMA AAVPLDLSEV SEEAGFDFSR
201: DWTTVKNACM NFGRDRFDIL KSLPRKDLQI LVGHGCPSLD AKVVFSAKLI RKRVHLDEGD VCSSCNLRTV CTRGYILTRK EDEARTLDVM RILLIYGFDH
301: IKETVENKPL LKLKSLKTVV RKLIHEIVKL SAVPIDPNLP PPIIKKPPPK VKQPPPPPKK RVGRDDVEMK KGDWLCPKCD FMNFAKNTVC LQCDAKRPKR
401: QLLPGEWECP RCNFLNYRRN ISCFHCEHDR PADEYSNSQM EAKQSALRKR LERPPRKSDV SSAWNFDFDD NESDGADVAA FEFADSSKAR ESSSADMSYR
501: GASKVSEDEE YRMAETMTTG RGDKFSERES LPSSRNGFDD FDDEEDDIDS YELDLSKGSQ TGGVSRMSYS DLESASDSEG FSEIDNSRES RYDNSRESRY
601: DNNRESRYAA KDEDEFEDHP SLRSTHLADS WHKTRGQSGS NNYRRASFGS ESDDGINSDL DEDIDKDFRN NGSRSQGSPN RASVRHNALA YSDDEPFSDD
701: VDSGMVDRFQ STRTKSSMNI KDNFGDTRHN LNGRRSSGHC YGRTERNERF NDFDMHRGSS VSDKSRRARG NQLDSGSRGL QRNVRRNWDR SGGFDGRH
Best Arabidopsis Sequence Match ( AT1G55040.1 )
(BLAST)
001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
Arabidopsis Description
Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [nucleus,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.