Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53578 | Canola | nucleus | 86.96 | 86.64 |
| AT1G55040.1 | Thale cress | nucleus, plastid | 74.28 | 72.44 |
| VIT_14s0128g00850.t01 | Wine grape | plastid | 43.84 | 44.21 |
| KRG96827 | Soybean | nucleus | 44.08 | 43.14 |
| KRH68541 | Soybean | nucleus | 43.48 | 42.81 |
| PGSC0003DMT400063483 | Potato | mitochondrion, plastid | 39.98 | 42.71 |
| Solyc01g099230.2.1 | Tomato | mitochondrion, plastid | 39.98 | 42.27 |
| Os07t0404300-01 | Rice | nucleus | 32.25 | 41.27 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.8 | 40.08 |
| TraesCS6A01G359500.1 | Wheat | mitochondrion | 37.56 | 38.11 |
| TraesCS6B01G392400.1 | Wheat | mitochondrion | 37.2 | 37.52 |
| TraesCS6D01G342400.1 | Wheat | mitochondrion | 36.59 | 37.0 |
| EER98389 | Sorghum | mitochondrion, plastid | 34.42 | 35.71 |
| CDY40590 | Canola | plastid | 14.25 | 28.5 |
| CDX93678 | Canola | plastid | 13.77 | 27.34 |
| CDY11563 | Canola | mitochondrion | 14.37 | 25.81 |
| CDX96267 | Canola | mitochondrion | 14.49 | 25.81 |
| CDX70775 | Canola | plastid | 14.25 | 17.08 |
| CDX78760 | Canola | plastid, vacuole | 14.37 | 16.98 |
| CDY16887 | Canola | plastid | 13.77 | 15.9 |
| CDY38459 | Canola | plastid | 13.29 | 15.36 |
Protein Annotations
| EnsemblPlants:CDY41729 | EnsemblPlantsGene:GSBRNA2T00073446001 | Gene3D:4.10.1060.10 | GO:A0A078HWF3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR001876 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | PANTHER:PTHR23111 | PANTHER:PTHR23111:SF29 |
| PFAM:PF00641 | PFscan:PS50199 | ProteinID:CDY41729 | ProteinID:CDY41729.1 | ScanProsite:PS01358 | SEG:seg |
| SMART:SM00547 | SUPFAM:SSF90209 | UniParc:UPI0004EDFE59 | UniProt:A0A078HWF3 | MapMan:16.12.5.3 | : |
Description
BnaA09g15570DBnaA09g15570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWF3]
Coordinates
chrLK032504:-:209213..212518
Molecular Weight (calculated)
92383.5 Da
IEP (calculated)
6.590
GRAVY (calculated)
-1.039
Length
828 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSISLLLI KRISLLNINP KSRRLFHPFL AKALSTSAQS NPNNSSSPEE NHKPSSSLSS RLSFVFDQID AIEKRHSEQD ETLERIRAWR QSKQPPTPPA
101: IRRDPDPEKS ESESVGDNER PEEDLTQTVL SKENGVVELV HPWPEWMELM EVLVKQNYFD LRRQRDDDDE DEMMVHSLGI DVSPPSSSNV GAALLQDFRA
201: VQNACVNFGK DRFDILRSLS RNDIQILVGH GCPATDRKVV FSGKLLRKRV HLDEGDVCSS CSLRNSCEKA FLLTNKEDEA RTLDLMKILF TYGFDPLNDT
301: VVTNKSLLKK KSVKTVVRKL LHEVVKLSKV PIDPNLTPPV IKKAPPKVKQ PPPPPKRRVG RDDVEMKKGD WLCPKCDFMN FAKNTICLQC DAKRPKRQLL
401: PGEWECPECN FLNYRRNMAC FHCDCKRPPD AFLENKTQET HRFTESQSEK VVKRDDVSNA WNFDFDDDES DGAEVAAFEY ADSSRKNQNL PMDGLRDPEE
501: EEFGNLPPGA RESSEIGGRS RRPGVGFDDF DDEDDVDSYE IDETGNREAP ARTSFASEEF SEDEQFPESK AGYNAHRGGS NRNGNSRGGF SRDNELGFSS
601: DDEASVTPRW KSSHVASTNR GPPSRKLTFG SDDEFGLDSD MEDDGPRSGL RGGGGQRSNG ARGGFKGKRR SYSASESDDD DMDDKEYRGS SFSGNRSRGG
701: NRGRMRGGRG GFNDYNASSG FSDNRSRGRG GRTGGGRRGG FDSDGEDYRG SGRSRGNRED RGGFGERMGS RSGGFDDGFD RKSSRGGRGA GSFRGSNRGG
801: GRGNRHGNSD GKDTDSADFR NSRRVIER
101: IRRDPDPEKS ESESVGDNER PEEDLTQTVL SKENGVVELV HPWPEWMELM EVLVKQNYFD LRRQRDDDDE DEMMVHSLGI DVSPPSSSNV GAALLQDFRA
201: VQNACVNFGK DRFDILRSLS RNDIQILVGH GCPATDRKVV FSGKLLRKRV HLDEGDVCSS CSLRNSCEKA FLLTNKEDEA RTLDLMKILF TYGFDPLNDT
301: VVTNKSLLKK KSVKTVVRKL LHEVVKLSKV PIDPNLTPPV IKKAPPKVKQ PPPPPKRRVG RDDVEMKKGD WLCPKCDFMN FAKNTICLQC DAKRPKRQLL
401: PGEWECPECN FLNYRRNMAC FHCDCKRPPD AFLENKTQET HRFTESQSEK VVKRDDVSNA WNFDFDDDES DGAEVAAFEY ADSSRKNQNL PMDGLRDPEE
501: EEFGNLPPGA RESSEIGGRS RRPGVGFDDF DDEDDVDSYE IDETGNREAP ARTSFASEEF SEDEQFPESK AGYNAHRGGS NRNGNSRGGF SRDNELGFSS
601: DDEASVTPRW KSSHVASTNR GPPSRKLTFG SDDEFGLDSD MEDDGPRSGL RGGGGQRSNG ARGGFKGKRR SYSASESDDD DMDDKEYRGS SFSGNRSRGG
701: NRGRMRGGRG GFNDYNASSG FSDNRSRGRG GRTGGGRRGG FDSDGEDYRG SGRSRGNRED RGGFGERMGS RSGGFDDGFD RKSSRGGRGA GSFRGSNRGG
801: GRGNRHGNSD GKDTDSADFR NSRRVIER
001: MAASISLLLI KRISHLHINP KSHRLFQPFL TKSLSTSPQS NTESTHEPNH KPSSLSSRLS FVFDQIDAIE KRHSEKDETL ERIRAWRQSK QTHQLKTPPS
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
101: APQQDPDLRE VESVVSNDKL DSCVVLEPIQ IDSGELSKEK GVIELVHPWP EWMELMERLV KQNYFDHRRE RDDDDMVNSL GIDVSSVGLG EDENVGVALF
201: QDFRAVQNAC SNFGKDRFDI LRSLSRNDIQ ILVGHGCPAT DRKVVFSGKL LRKRVHLDEG DVCSSCSLRN SCEKAFLLTN KEDEARTIDL MRILFTYGFD
301: PLNGTVANKS LLKKKSVKSV VRKLLHEIVK LSAVPIDPNL TPPVIKRAPP KVKQPPPTPK RRVGRDDVEM KKGDWLCPKC DFMNFAKNTI CLQCDAKRPK
401: RQLLPGEWEC PECNFLNYRR NMACFHCDCK RPADAILENK PQETYRFTEA QTDRVVKRDD VSNAWNFDFD DDESDGAEVA AFEYADSSKK NENLLREGLR
501: DPEEEFGNLP PGARESSEFG RSRRPGVGFD DFDDEDDIDS YEIDESKERD VPVEGARSSF ASDEFSEDEK FPESKSGFNA HRGGSSNFHN SGKKHGNSKG
601: GFSRDDELGF SSDDEVSANP RWKSSHVAST QRGPPSRKLT FGSDEEFGLD SDMEDDSPRS GLRRGQRNNG ARGGFKGKRS SYSASESDDD MDDQEYRGSS
701: FSGNRSRGSR GRMRGGGRGG FNDNFASDSY RGSNGSSANR SRGRGGRIGS RRSSFDSDDE DYRGSSSSAS RSRGNREDSG GVGGRMGSRR GGFDDEFDRK
801: SSRGRGSGSF RGSNRGGRGG GGGGNRHGHS DGKDTDVGDF RNSRRVIER
Arabidopsis Description
Uncharacterized protein F14C21.55 [Source:UniProtKB/TrEMBL;Acc:Q9C7M2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.