CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96267	Canola	mitochondrion	83.3	82.58
AT1G70650.2	Thale cress	nucleus	64.43	49.92
VIT_01s0011g05660.t01	Wine grape	nucleus	40.56	42.31
GSMUA_AchrUn_...	Banana	nucleus	34.49	40.98
Solyc08g014510.2.1	Tomato	nucleus, plastid	41.21	39.58
PGSC0003DMT400064951	Potato	mitochondrion, nucleus	39.91	38.33
KRH70339	Soybean	mitochondrion	43.38	37.88
Os03t0712200-01	Rice	mitochondrion	42.08	37.09
KXG37731	Sorghum	mitochondrion	41.43	36.31
HORVU4Hr1G007570.1	Barley	nucleus	25.6	36.31
TraesCS4B01G046800.1	Wheat	mitochondrion	41.21	35.92
TraesCS4A01G267600.1	Wheat	mitochondrion	41.0	35.86
TraesCS4D01G046600.1	Wheat	mitochondrion	41.0	35.73
Zm00001d013432_P001	Maize	mitochondrion	40.78	35.67
KRH33226	Soybean	nucleus	25.16	35.58
CDX93678	Canola	plastid	25.16	27.82
CDY40590	Canola	plastid	24.95	27.78
CDY53578	Canola	nucleus	26.9	14.92
CDY41729	Canola	nucleus	25.81	14.37
CDY38459	Canola	plastid	19.31	12.43
CDX78760	Canola	plastid, vacuole	18.87	12.41
CDX70775	Canola	plastid	18.22	12.16
CDY16887	Canola	plastid	18.44	11.86

Protein Annotations

EnsemblPlants:CDY11563	EnsemblPlantsGene:GSBRNA2T00049663001	Gene3D:4.10.1060.10	GO:A0A078FHN0	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR001876	InterPro:Znf_RanBP2	InterPro:Znf_RanBP2_sf	PANTHER:PTHR23111	PANTHER:PTHR23111:SF23
PFAM:PF00641	PFscan:PS50199	ProteinID:CDY11563	ProteinID:CDY11563.1	ScanProsite:PS01358	SEG:seg
SMART:SM00547	SUPFAM:SSF90209	UniParc:UPI0004EDB5AB	UniProt:A0A078FHN0	MapMan:16.12.5.3	:

Description

BnaC06g31760DBnaC06g31760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHN0]

Coordinates

chrLK032012:-:132191..134304

Molecular Weight (calculated)

53581.3 Da

IEP (calculated)

7.776

GRAVY (calculated)

-0.894

Length

461 amino acids

Sequence
(BLAST)

001: MMRFFKTHHY HGGYIRRTIL YPKPVNAVSQ HIHDLAKTQN PRSRLVDDPS SHPWPEWLDL MGMLVKKGYF GETVTSPKES NHIRTACLDF ARHRFTLVRY
101: LSKKDMKVIA GCGCPSIDRK VVNSGKRLRA YVGIDEVNVC GSCNLRGKCE RAYAQARDEE GARTIDVMRI LLTYGLDSIS PAVVNRACQT KFVEDSVRKL
201: LRESVEYSLQ DVECSETVAS RDELHPNSLD NDERDPRKRP GDWHCTECKF LNFAKNIRCL RCDVFSEERL KQLKQEQKDH LPLKKGDWIC QTCNFLNFAK
301: NTGCLRCKDK PSMRQINPGE WECESCYYIN FRRNSVCLKC DHKRQKAQNV TPDSKSVGDD HSRVSKTWSF VEEEEEEEEE GEEDGVMGFP VEGGRSSVSR
401: SVEKREKWKL EMTQRMRSNG HEKKKDDDEE RESRRCYDRR KIELLGNCSD DGEMDDWFSP T

Best Arabidopsis Sequence Match ( AT1G70650.1 )
(BLAST)

001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST

Arabidopsis Description

Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.