Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 43.44 | 49.48 |
| Solyc08g014510.2.1 | Tomato | nucleus, plastid | 46.83 | 43.12 |
| PGSC0003DMT400064951 | Potato | mitochondrion, nucleus | 46.61 | 42.92 |
| CDY11563 | Canola | mitochondrion | 42.31 | 40.56 |
| Bra016196.1-P | Field mustard | mitochondrion, nucleus | 42.31 | 40.3 |
| CDX96267 | Canola | mitochondrion | 42.31 | 40.22 |
| KRH70339 | Soybean | mitochondrion | 47.74 | 39.96 |
| HORVU4Hr1G007570.1 | Barley | nucleus | 28.73 | 39.08 |
| KRH33226 | Soybean | nucleus | 28.73 | 38.96 |
| Os03t0712200-01 | Rice | mitochondrion | 43.21 | 36.52 |
| KXG37731 | Sorghum | mitochondrion | 43.21 | 36.31 |
| TraesCS4B01G046800.1 | Wheat | mitochondrion | 43.44 | 36.29 |
| TraesCS4A01G267600.1 | Wheat | mitochondrion | 42.99 | 36.05 |
| Zm00001d013432_P001 | Maize | mitochondrion | 42.99 | 36.05 |
| TraesCS4D01G046600.1 | Wheat | mitochondrion | 42.53 | 35.54 |
| VIT_17s0000g02310.t01 | Wine grape | mitochondrion, plastid | 28.05 | 30.24 |
| AT1G70650.2 | Thale cress | nucleus | 40.5 | 30.08 |
| VIT_14s0128g00850.t01 | Wine grape | plastid | 26.24 | 14.13 |
| VIT_08s0056g01170.t01 | Wine grape | endoplasmic reticulum, plastid | 21.95 | 11.04 |
Protein Annotations
| EntrezGene:100264495 | wikigene:100264495 | MapMan:16.12.5.3 | Gene3D:4.10.1060.10 | ProteinID:CCB50790 | ProteinID:CCB50790.1 |
| UniProt:F6HFE1 | EMBL:FN595752 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001876 |
| EntrezGene:LOC100264495 | wikigene:LOC100264495 | PFAM:PF00641 | ScanProsite:PS01358 | PFscan:PS50199 | PANTHER:PTHR23111 |
| PANTHER:PTHR23111:SF23 | SMART:SM00547 | SUPFAM:SSF90209 | UniParc:UPI00021081D3 | ArrayExpress:VIT_01s0011g05660 | EnsemblPlantsGene:VIT_01s0011g05660 |
| EnsemblPlants:VIT_01s0011g05660.t01 | unigene:Vvi.608 | RefSeq:XP_002281205 | RefSeq:XP_002281205.1 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf |
Description
No Description!
Coordinates
chr1:-:5369499..5372982
Molecular Weight (calculated)
49966.1 Da
IEP (calculated)
7.927
GRAVY (calculated)
-0.740
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MEILTKKGYL EEGDGNPFQN GAMGVKEANR IRTACLDFTR DRFDLISYFS RKDIEVVAGS GCPSTDRKVV NSGKRLRAHV DIDEGNVCSS CILRGNCERA
101: YVMASEGEGG RTVDLMRILL TYGLDPITGT VENMLCRSKT IEESARRLLK AMVEFGSKEF DSLLPNATSS KKVASLQESL ASAEKGRTNL PIKQGDWLCP
201: KCNFLNFARN IKCLRCNDIS QERLRKLWED QDHLPLKKGD WICNKCNFLN FARNTICLQC KEKPPKRELN PGDWECDSCN FINFGRNMVC LKCDHKRPKA
301: SAQPGHEIQG FSSYHKGSRF VKDEDETSGE LPIRQETQSP NNGTARWRFV EDESKDIDGS KSWDGISGFV DFPIAGGKSE LSQNSSKRSK WKAEMLEKSR
401: PHSRGGESRS ASLQRRPEFV ECSSDEEMAE WFGHGKRMQM EE
101: YVMASEGEGG RTVDLMRILL TYGLDPITGT VENMLCRSKT IEESARRLLK AMVEFGSKEF DSLLPNATSS KKVASLQESL ASAEKGRTNL PIKQGDWLCP
201: KCNFLNFARN IKCLRCNDIS QERLRKLWED QDHLPLKKGD WICNKCNFLN FARNTICLQC KEKPPKRELN PGDWECDSCN FINFGRNMVC LKCDHKRPKA
301: SAQPGHEIQG FSSYHKGSRF VKDEDETSGE LPIRQETQSP NNGTARWRFV EDESKDIDGS KSWDGISGFV DFPIAGGKSE LSQNSSKRSK WKAEMLEKSR
401: PHSRGGESRS ASLQRRPEFV ECSSDEEMAE WFGHGKRMQM EE
001: MLRFFKTDHR LFHRIIGYTR PFHGLAKTQN AEIARPGLVD PSSHPWPEWL DLMGMLAKKG YFEESLIPLM SSKESNHIRT ACLNFARHRF TLVRNLSKKD
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
101: IKVIAGCGCP STDRKVVNSG KRLRAYVGID EGNVCGSCNL RGKCERAYAQ ARDDEGARTI DVMRLLLTYG LDSISPTVEN RACQTKLVED SVRKLLRESV
201: AYSLTDFESA ETETAGDELQ PNSQDIDERD PRKRPGDWYC TECKFLNFAK NIRCLRCDVF SEERLKQLKE EQKDHLPLKK GDWICQTCNF LNFSKNTRCL
301: RCKDKPTLRQ INPGEWECES CNYINFRRNS ICLKCDHKRQ KAANVTPDSK TVADRQSGVT KTWSFVEEES VKRCNGEEEE EEDGFMGFPV EGGRSNVSKS
401: AEKREQWKLE MTQRIRSNGT KAKKDDNTKN ETESKCYDRR RNELLGNISD DGEMDDWFVS KQDRST
Arabidopsis Description
Ran BP2/NZF zinc finger-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6V2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.