Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G041700.1 Wheat mitochondrion, plastid 92.75 92.91
HORVU4Hr1G007170.4 Barley cytosol, nucleus 78.76 91.94
TraesCS4A01G269900.1 Wheat plastid 91.54 91.54
Os03t0708900-01 Rice nucleus 51.3 58.93
Zm00001d013449_P001 Maize mitochondrion 45.42 50.97
EER93589 Sorghum mitochondrion, plastid 47.32 49.28
GSMUA_Achr6P24110_001 Banana plastid 35.41 48.12
VIT_17s0000g02310.t01 Wine grape mitochondrion, plastid 28.67 40.49
Solyc03g118680.2.1 Tomato plastid 27.98 39.8
PGSC0003DMT400014472 Potato plastid 27.81 39.56
Bra018736.1-P Field mustard plastid 25.91 35.97
CDY40590 Canola plastid 25.56 35.75
CDX93678 Canola plastid 25.39 35.25
KRH48632 Soybean mitochondrion, plastid 27.12 33.98
KRH39085 Soybean plastid 26.77 33.84
AT1G48570.1 Thale cress plastid 24.52 31.21
TraesCS4B01G046800.1 Wheat mitochondrion 24.87 27.22
TraesCS6B01G392400.1 Wheat mitochondrion 22.97 16.2
TraesCS3B01G370800.2 Wheat plastid 17.79 9.39
Protein Annotations
EnsemblPlants:TraesCS4B01G044200.1EnsemblPlantsGene:TraesCS4B01G044200Gene3D:4.10.1060.10InterPro:IPR001876InterPro:Znf_RanBP2InterPro:Znf_RanBP2_sf
PANTHER:PTHR23111PANTHER:PTHR23111:SF40PFAM:PF00641PFscan:PS50199ScanProsite:PS01358SEG:seg
SMART:SM00547SUPFAM:SSF90209MapMan:16.12.5.3:::
Description
No Description!
Coordinates
chr4B:+:32167571..32172155
Molecular Weight (calculated)
63651.8 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.703
Length
579 amino acids
Sequence
(BLAST)
001: MASSKLLTAA VSSSIRRFYR LASSPLLPPP ASRRLPGPLL SARFCSAAAA ATTPVDAAAP APAYSALAAA TTPVDAASSA VAAVSEGHPW PEWADFLEKL
101: RAKGYFVRPP LASGAPVGEE VAADAVAKPD YPFRDQNRVK NACLKFARER FDLLSSLPKK DIQAIVECGC PNIFRKAVSS AKRLREFVQV DEGDACSVCK
201: LRGSCDKAYV IPKAEEAART VDVVRILLTY AIDPANLSGE NSVGGGVQES AKKLLSDLTM LCDTTIDPSL PKPVIHTYSK QDSSTKPDKG KQSSRVSAGK
301: GRETAVTEMK KGDWLCPNCN FLNFARNRQC LECKVDGPKK IEAAISEMKM GDWICPGCAF MNFSRNKMCF KCEGQRPKRQ LNPGEWECPS CDFVNFRRNQ
401: ECKKCSHDRP EDDTQDNKLG YDVWRNTKGA NKDRSFYSVR QEDDDGDEEG LPYKGEERRH VASRRASPAR REFAGKSSNH GDEDDALPYK EGDRRVSSRR
501: ASPARKGHAK NDGDDEDVEL DVSPYDGARK HGSSRRAAPG RRGFTKDEDD VLPYEGARKH VVSRRATPSR RRFTAARGE
Best Arabidopsis Sequence Match ( AT1G48570.1 )
(BLAST)
001: MSSSRIFLVG NSIFRPHKPS FPLSFNRFPS VSLRFRCFSS DAAAAVATTV DSDSPSLTPH PWPEWITFVD RLKTKGYFTK DTEDDTVYQE MILVKDACLS
101: FARDRYDVLR SLSSGDVQAL VERGCPNLFR KTVNSSKRIR AHVKLNEGDV CGSCDLRSSC DRAYVILKDT EADARTVDVM RLLLFNALDS IVISRGEVPP
201: GKELVHESAR RLLLELVEFS EKPLIPALPK PSSKESSLPS KERAFKSRND EPSQRVAFKS RNDDPSQRVA FKSRNDEPSH RVAFKSRNDE SSQRDRPLYS
301: ADWACPKCDF VNFARNERCR ECNEVADRRP VAAVVKEGDW LCPECSFLNF TRNQSCLKCK AKGPKKTSMV NIVEMKKGDW NCTGCGYMNF ASNKQCRECR
401: EQRHKTLAEP GDWECPSCDF VNFRRNDACK KCECKRPSQA NNDQEDHTWK RPALV
Arabidopsis Description
T1N15.19 [Source:UniProtKB/TrEMBL;Acc:Q9LP67]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.