Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0750500-01 | Rice | cytosol | 64.65 | 29.77 |
| Zm00001d031558_P001 | Maize | plastid | 18.18 | 6.21 |
| Zm00001d033426_P001 | Maize | plastid | 17.17 | 6.05 |
| Zm00001d002380_P001 | Maize | plastid | 17.17 | 6.01 |
| Zm00001d047140_P001 | Maize | plastid | 17.17 | 6.01 |
| Zm00001d038564_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 6.06 | 4.84 |
Protein Annotations
| EnsemblPlants:Os05t0221400-01 | EnsemblPlantsGene:Os05g0221400 | InterPro:DUF814 | PANTHER:PTHR13049 | PANTHER:PTHR13049:SF3 | PFAM:PF05670 |
| ProteinID:BAF16864.1 | ProteinID:BAS92867.1 | UniParc:UPI0000E123B3 | UniProt:Q0DJV9 | MapMan:35.2 | : |
Description
Similar to 2o545-prov protein. (Os05t0221400-01)
Coordinates
chr5:-:7455582..7461042
Molecular Weight (calculated)
11111.5 Da
IEP (calculated)
8.492
GRAVY (calculated)
-0.137
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: LNAIVLEHRF HVDKMSSAHV YLRLNKGQTM DDISEGVLED CAQLVKANSI QGNKTNNIDV VYTPWYNLKK TPSMDVGQVG FHNSKLVRSL FPLLPVLGM
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
Arabidopsis Description
Coiled-coil protein [Source:UniProtKB/TrEMBL;Acc:Q9LYE1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.