Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d002380_P001 | Maize | plastid | 99.65 | 99.65 |
Zm00001d033426_P001 | Maize | plastid | 97.53 | 98.22 |
Zm00001d031558_P001 | Maize | plastid | 96.47 | 94.14 |
Zm00001d038564_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 36.04 | 82.26 |
Zm00001d010425_P005 | Maize | cytosol | 39.93 | 52.56 |
Zm00001d043479_P001 | Maize | cytosol, plastid | 30.04 | 40.87 |
Os05t0221400-01 | Rice | cytosol, plasma membrane | 6.01 | 17.17 |
Protein Annotations
EnsemblPlants:Zm00001d047140_P001 | EnsemblPlants:Zm00001d047140_T001 | EnsemblPlantsGene:Zm00001d047140 | Gene3D:3.40.50.720 | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR13049 | PANTHER:PTHR13049:SF3 | ProteinID:AQL05711.1 | SEG:seg |
TMHMM:TMhelix | UniParc:UPI000843AA52 | UniProt:A0A1D6P794 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr9:-:119768423..119773303
Molecular Weight (calculated)
31702.9 Da
IEP (calculated)
10.666
GRAVY (calculated)
-0.364
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHPPPPLPP PRISPPPADP ALALCGSAAG LLRHGRGHAA PGIRRRLAAS RFRGYNAVRV PMETSPETFL WTSEIAIPVH PTIKVVYSAH PTADVFINFA
101: SFRSVAMSSM SALMWPTIRV VAIIVIIGPA TIGGIQAGAF KIEMLSRREK ATNFKPDYDI DIHMKVLAMS VQESSILTGY KMKVRTIKVE KRINEIVNRL
201: NKTKVERKPD LKAEREAISA AEKAERKAQL RDKKRREEME RLDKEKQADI RSYKGLMVQE KMTSNKQIAS GSKTLQELEE DFM
101: SFRSVAMSSM SALMWPTIRV VAIIVIIGPA TIGGIQAGAF KIEMLSRREK ATNFKPDYDI DIHMKVLAMS VQESSILTGY KMKVRTIKVE KRINEIVNRL
201: NKTKVERKPD LKAEREAISA AEKAERKAQL RDKKRREEME RLDKEKQADI RSYKGLMVQE KMTSNKQIAS GSKTLQELEE DFM
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
Arabidopsis Description
Coiled-coil protein [Source:UniProtKB/TrEMBL;Acc:Q9LYE1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.