Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002380_P001 | Maize | plastid | 94.48 | 96.82 |
| Zm00001d047140_P001 | Maize | plastid | 94.14 | 96.47 |
| Zm00001d033426_P001 | Maize | plastid | 93.1 | 96.09 |
| Zm00001d038564_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 35.17 | 82.26 |
| Zm00001d010425_P005 | Maize | cytosol | 39.31 | 53.02 |
| Zm00001d043479_P001 | Maize | cytosol, plastid | 29.31 | 40.87 |
| Os05t0221400-01 | Rice | cytosol, plasma membrane | 6.21 | 18.18 |
Protein Annotations
| EnsemblPlants:Zm00001d031558_P001 | EnsemblPlants:Zm00001d031558_T001 | EnsemblPlantsGene:Zm00001d031558 | Gene3D:3.40.50.720 | ncoils:Coil | PANTHER:PTHR13049 |
| PANTHER:PTHR13049:SF3 | ProteinID:ONM03136.1 | SEG:seg | UniParc:UPI000843647A | UniProt:A0A1D6KJM9 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:-:194162557..194176389
Molecular Weight (calculated)
32428.7 Da
IEP (calculated)
10.602
GRAVY (calculated)
-0.335
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHPPPPPPP PRISPPPADP ALALCGSAAG LLRHGHGHAA PGIRRRLAAS RFRGYSAVRV PMETSPETFL WTSEIAIPVH PTIKVVYSAH PTADVFINFA
101: SFRSVAMSSM SALMWPTIRV VAIIVSVFLN QVIIGPATIG GIQAGAFKIE MLSRREKATN FKPDYDIDIH MKVLAMSVQE SSILTGYKMK VRTIKVEKRI
201: NEIVNRLNKT KVERKPDLKA EREAISAAEK AERKAQLRDK KRREEMERLD KEKQADIRSY KGLMVQEKMT SNKQIASGSK TLQELEEDFM
101: SFRSVAMSSM SALMWPTIRV VAIIVSVFLN QVIIGPATIG GIQAGAFKIE MLSRREKATN FKPDYDIDIH MKVLAMSVQE SSILTGYKMK VRTIKVEKRI
201: NEIVNRLNKT KVERKPDLKA EREAISAAEK AERKAQLRDK KRREEMERLD KEKQADIRSY KGLMVQEKMT SNKQIASGSK TLQELEEDFM
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
Arabidopsis Description
Coiled-coil protein [Source:UniProtKB/TrEMBL;Acc:Q9LYE1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.