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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047140_P001 Maize plastid 99.65 99.65
Zm00001d033426_P001 Maize plastid 97.88 98.58
Zm00001d031558_P001 Maize plastid 96.82 94.48
Zm00001d038564_P001 Maize cytosol, mitochondrion, nucleus, plastid 36.04 82.26
Zm00001d010425_P005 Maize cytosol 39.93 52.56
Zm00001d043479_P001 Maize cytosol, plastid 30.04 40.87
Os05t0221400-01 Rice cytosol, plasma membrane 6.01 17.17
Protein Annotations
EnsemblPlants:Zm00001d002380_P001EnsemblPlants:Zm00001d002380_T001EnsemblPlantsGene:Zm00001d002380Gene3D:3.40.50.720GO:GO:0005575GO:GO:0016020
GO:GO:0016021ncoils:CoilPANTHER:PTHR13049PANTHER:PTHR13049:SF3ProteinID:ONM14114.1SEG:seg
TMHMM:TMhelixUniParc:UPI000844B7BEUniProt:A0A1D6E037MapMan:35.1::
Description
No Description!
Coordinates
chr2:+:11528245..11533125
Molecular Weight (calculated)
31686.8 Da
IEP (calculated)
10.666
GRAVY (calculated)
-0.383
Length
283 amino acids
Sequence
(BLAST)
001: MHHPPPPPPP PRISPPPADP ALALCGSAAG LLRHGRGHAA PGIRRRLAAS RFRGYNAVRV PMETSPETFL WTSEIAIPVH PTIKVVYSAH PTADVFINFA
101: SFRSVAMSSM SALMWPTIRV VAIIVIIGPA TIGGIQAGAF KIEMLSRREK ATNFKPDYDI DIHMKVLAMS VQESSILTGY KMKVRTIKVE KRINEIVNRL
201: NKTKVERKPD LKAEREAISA AEKAERKAQL RDKKRREEME RLDKEKQADI RSYKGLMVQE KMTSNKQIAS GSKTLQELEE DFM
Best Arabidopsis Sequence Match ( AT5G11500.1 )
(BLAST)
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
Arabidopsis Description
Coiled-coil protein [Source:UniProtKB/TrEMBL;Acc:Q9LYE1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.