Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002380_P001 | Maize | plastid | 98.58 | 97.88 |
| Zm00001d047140_P001 | Maize | plastid | 98.22 | 97.53 |
| Zm00001d031558_P001 | Maize | plastid | 96.09 | 93.1 |
| Zm00001d038564_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 36.3 | 82.26 |
| Zm00001d010425_P005 | Maize | cytosol | 40.21 | 52.56 |
| Zm00001d043479_P001 | Maize | cytosol, plastid | 30.25 | 40.87 |
| Os05t0221400-01 | Rice | cytosol, plasma membrane | 6.05 | 17.17 |
Protein Annotations
| EnsemblPlants:Zm00001d033426_P001 | EnsemblPlants:Zm00001d033426_T001 | EnsemblPlantsGene:Zm00001d033426 | Gene3D:3.40.50.720 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR13049 | PANTHER:PTHR13049:SF3 | ProteinID:ONM07593.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0008450863 | UniProt:A0A1D6KYY1 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1:+:262667713..262672481
Molecular Weight (calculated)
31465.6 Da
IEP (calculated)
10.666
GRAVY (calculated)
-0.364
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHPPPPPPR ISPPPADPAL ALCGSAAGLL RHGRGHAAPG IRRRLAASRF RGYSAVRVPM ETSPETFLWT SEIAIPVHPT IKVVYSAHPT ADVFINFASF
101: RSVAMSSMSA LMWPTIRVVA IIVIIGPATI GGIQAGAFKI EMLSRREKAT NFKPDYDIDI HMKVLAMSVQ ESSILTGYKM KVRTIKVEKR INEIVNRLNK
201: TKVERKPDLK AEREAISAAE KAERKAQLRD KKRREEMERL DKEKQADIRS YKGLMVQEKM TSNKQIASGS KTLQELEEDF M
101: RSVAMSSMSA LMWPTIRVVA IIVIIGPATI GGIQAGAFKI EMLSRREKAT NFKPDYDIDI HMKVLAMSVQ ESSILTGYKM KVRTIKVEKR INEIVNRLNK
201: TKVERKPDLK AEREAISAAE KAERKAQLRD KKRREEMERL DKEKQADIRS YKGLMVQEKM TSNKQIASGS KTLQELEEDF M
001: MVFYFKARPD AGDYTIFMGL DKFENEELIK YGFPEDVWFH VDKMSSAHVY LRLHRGQSFD DISEGVLEDC AQLVKANSIQ GNKVNNVDVV YTPWSNLKKT
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
101: ASMDVGQVGF HNSKMVRTIR VEKRVNEIVN RLNKTKVERT PDLRAEREAV NAAERAERKQ HLREKKKREE IDRLEKERQS EMRSYKGLMV TDKMTSNKDI
201: ASSNKSLQEL EDDFM
Arabidopsis Description
Coiled-coil protein [Source:UniProtKB/TrEMBL;Acc:Q9LYE1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.