Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0121275-00 | Rice | cytosol, golgi, plastid | 15.6 | 56.8 |
| KXG24291 | Sorghum | cytosol, nucleus, peroxisome | 43.74 | 39.02 |
| Os08t0121500-00 | Rice | cytosol | 22.86 | 37.96 |
| Os11t0278300-00 | Rice | cytosol | 36.7 | 37.28 |
| Os01t0564600-00 | Rice | cytosol | 25.93 | 29.72 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4344546 | EMBL:AK111473 | ProteinID:BAD10789.1 | ProteinID:BAD10821.1 | ProteinID:BAF22795.1 |
| ProteinID:BAT03596.1 | InterPro:DUF247_pln | ProteinID:EAZ41344.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:Os08g0120900 | EnsemblPlants:Os08t0120900-01 | PFAM:PF03140 | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | UniProt:Q6YPE9 |
| UniParc:UPI000023B180 | RefSeq:XP_015649707.1 | SEG:seg | : | : | : |
Description
Protein of unknown function DUF247, plant family protein. (Os08t0120900-01)
Coordinates
chr8:+:1148943..1150555
Molecular Weight (calculated)
50341.1 Da
IEP (calculated)
6.677
GRAVY (calculated)
0.078
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEVVAIHV DVGHGVPDEA QASTKIQKLD GSHITPIAQG KIHRFPRGLI GIGGSNEQRY IVPTFVAIGP YHHGKPHLHK MEEVKLAAMN RFIATANGAS
101: AGDVSGKLLS VVGDVRGCYA DDEKLKCFSD DDFAAMMLVD GCFLLQFMME KRKPLFEGRA LSSEYSILKD MMLLENQVPW LVLDTLMEFL PMEMEVEQNV
201: RCFVADVGDM FLRNNKEHEV SLTTSCFSVL FEVSPHKSSF LKDYKPANLL DLLRSSQIFR MPTEELSVRL VGSSLLSSSA VELAQIGVNL TASTAEWFGD
301: MSVKEGPVYG ELSLSPIFLN DVSAGWLVNM AALEASGGAT TADQSSSSSS VMCSFLSVVA MLMDREEDVH QLRAKQVLYS TLSNAQTLDF FKRISQHLGF
401: GHRYFYILQQ INKFKQGRPV RSAVHKFLYK HIRAISIILS IASVLVGIFK ALREL
101: AGDVSGKLLS VVGDVRGCYA DDEKLKCFSD DDFAAMMLVD GCFLLQFMME KRKPLFEGRA LSSEYSILKD MMLLENQVPW LVLDTLMEFL PMEMEVEQNV
201: RCFVADVGDM FLRNNKEHEV SLTTSCFSVL FEVSPHKSSF LKDYKPANLL DLLRSSQIFR MPTEELSVRL VGSSLLSSSA VELAQIGVNL TASTAEWFGD
301: MSVKEGPVYG ELSLSPIFLN DVSAGWLVNM AALEASGGAT TADQSSSSSS VMCSFLSVVA MLMDREEDVH QLRAKQVLYS TLSNAQTLDF FKRISQHLGF
401: GHRYFYILQQ INKFKQGRPV RSAVHKFLYK HIRAISIILS IASVLVGIFK ALREL
001: MVLFSDGRST STHKRYRRLS WFVPIHSFHE ITRRDLGQNL HNHVETYVEP SKIEVKEEKP RETREEWVIS IKDKMEKALS YDATNSWDKL CIYRVPFYLQ
101: ENDKKSYLPQ TVSIGPYHHG KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML VLDGCFVLEL FKGTIQGFQK
201: IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301: SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK IPKLLIHDGT KSLFSNLIAF EQCHTQSSNN ITSYIIFMDN
401: LINSSQDVSY LHHDGIIEHW LGSDSEVADL FNRLCKEVIF DPKDGYLSQL SREVNRYYSR KWNSLKATLR QKYFNNPWAY FSFSAAVILL FLTFFQSFFA
501: VYAYYKPLS
101: ENDKKSYLPQ TVSIGPYHHG KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML VLDGCFVLEL FKGTIQGFQK
201: IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301: SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK IPKLLIHDGT KSLFSNLIAF EQCHTQSSNN ITSYIIFMDN
401: LINSSQDVSY LHHDGIIEHW LGSDSEVADL FNRLCKEVIF DPKDGYLSQL SREVNRYYSR KWNSLKATLR QKYFNNPWAY FSFSAAVILL FLTFFQSFFA
501: VYAYYKPLS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.