Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24308 | Sorghum | cytosol | 44.9 | 51.0 |
| Os08t0121275-00 | Rice | cytosol, golgi, plastid | 11.96 | 48.8 |
| Os08t0120900-01 | Rice | cytosol | 39.02 | 43.74 |
| KXG21028 | Sorghum | plastid | 32.16 | 39.61 |
| OQU79618 | Sorghum | cytosol | 31.76 | 37.5 |
| EES08977 | Sorghum | cytosol | 29.61 | 30.32 |
| OQU79990 | Sorghum | nucleus, peroxisome, plastid | 28.43 | 30.27 |
| OQU84013 | Sorghum | cytosol | 29.8 | 28.68 |
| OQU84018 | Sorghum | plasma membrane | 29.61 | 27.96 |
| OQU84015 | Sorghum | cytosol | 16.47 | 26.09 |
Protein Annotations
| EnsemblPlants:KXG24291 | EnsemblPlantsGene:SORBI_3007G021000 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | PFAM:PF03140 | ProteinID:KXG24291 | ProteinID:KXG24291.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00081ACE35 | UniProt:A0A1B6PF17 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr7:-:1986281..1988172
Molecular Weight (calculated)
56147.7 Da
IEP (calculated)
7.808
GRAVY (calculated)
-0.111
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MHDNVEFEMT VPCYYPCSPV SHQSNPPAGG AMDTNTRTIL VIDDNLPAIA ERMATTTARL EADFSEVETK IHRFPGSLRG IGGDNGRYVV PSVVAIGPYH
101: HGAPHLQKME EVKLAAAYYL CRASGRSTDQ VYEKVRSVAG AARGCYDADD PAVVGLGDAQ FAAMMFLDGC FLLQYMVAGG DADDDDATPP VLQNRMTLST
201: GPSIQKDIFL LENQIPWLVL DALAEFMFVD VRGFVVGMGD KFLPWKGRMK KKPKDDGRRC CRRGMHCGSC IPTTTALAKT DEESRGVGSS STEQHKPPPP
301: PHLLGLLRFT QMSCMPAQAK NYRGVSSSWS SSAVELAEMG VVLTPSTEAW FGDMSLQRCC LYGKLSLSPV FLSDVTACWL VNMAALEAST AGAARDDTDG
401: FVVSSYLSVL AMLMDRKEDV HELRRRGLVH GALSNKQALG FFKGLGQHLR FGRRYFAALE EIDSYKRYRS VRIKVYKFVY NNYKFIAAFL SVTGVLIGIF
501: KTLLSLQRHC
101: HGAPHLQKME EVKLAAAYYL CRASGRSTDQ VYEKVRSVAG AARGCYDADD PAVVGLGDAQ FAAMMFLDGC FLLQYMVAGG DADDDDATPP VLQNRMTLST
201: GPSIQKDIFL LENQIPWLVL DALAEFMFVD VRGFVVGMGD KFLPWKGRMK KKPKDDGRRC CRRGMHCGSC IPTTTALAKT DEESRGVGSS STEQHKPPPP
301: PHLLGLLRFT QMSCMPAQAK NYRGVSSSWS SSAVELAEMG VVLTPSTEAW FGDMSLQRCC LYGKLSLSPV FLSDVTACWL VNMAALEAST AGAARDDTDG
401: FVVSSYLSVL AMLMDRKEDV HELRRRGLVH GALSNKQALG FFKGLGQHLR FGRRYFAALE EIDSYKRYRS VRIKVYKFVY NNYKFIAAFL SVTGVLIGIF
501: KTLLSLQRHC
001: MATPSKRRPP PPPPPPPRLL VLPPLPPPPP PPPPQLPFGP KLPFPHIIIR RKARRNYQLR PMLTWYFLTF MMRQKLQTRN QQPEETREEW VIWIKDKMEQ
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGT
401: KSLFSNLIAY EQCHIDSTND ITSYIIFMDN LIDSAEDIRY LHYYDIIEHW LGNDSEVADV FNRLCQEVAF DLENTYLSEL SNKVDRYYNR KWNVLKATLK
501: HKYFSNPWAY FSFFAAVILL LLTLFQSFFT SYPYFKPPS
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGT
401: KSLFSNLIAY EQCHIDSTND ITSYIIFMDN LIDSAEDIRY LHYYDIIEHW LGNDSEVADV FNRLCQEVAF DLENTYLSEL SNKVDRYYNR KWNVLKATLK
501: HKYFSNPWAY FSFFAAVILL LLTLFQSFFT SYPYFKPPS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:F4IZB4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.