CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048651_P001	Maize	cytosol, endoplasmic reticulum, plastid	68.67	63.45
HORVU1Hr1G084670.1	Barley	cytosol	52.61	51.68
TraesCS1D01G391800.1	Wheat	cytosol, golgi, peroxisome	50.2	49.41
TraesCS1B01G410000.1	Wheat	cytosol	50.4	49.22
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	49.8	49.01
TraesCS1D01G391700.1	Wheat	cytosol	48.8	47.09
TraesCS1B01G409900.1	Wheat	cytosol	47.59	46.65
TraesCS1A01G383600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	44.78	46.65
OQU84013	Sorghum	cytosol	44.98	42.26
OQU84018	Sorghum	plasma membrane	40.76	37.59
OQU84015	Sorghum	cytosol	23.29	36.02
KXG24308	Sorghum	cytosol	30.12	33.41
OQU79618	Sorghum	cytosol	28.92	33.33
KXG24291	Sorghum	cytosol, nucleus, peroxisome	30.32	29.61
OQU79990	Sorghum	nucleus, peroxisome, plastid	28.11	29.23
KXG21028	Sorghum	plastid	24.1	28.99

Protein Annotations

EnsemblPlants:EES08977	EnsemblPlantsGene:SORBI_3005G216600	EntrezGene:8070233	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	ProteinID:EES08977	ProteinID:EES08977.1
RefSeq:XP_002449989.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A863CA	UniProt:C5Y7Z8	MapMan:35.2

Description

hypothetical protein

Coordinates

chr5:+:70224366..70226292

Molecular Weight (calculated)

57115.9 Da

IEP (calculated)

5.610

GRAVY (calculated)

-0.129

Length

498 amino acids

Sequence
(BLAST)

001: MEPTAAWVPF NVQLSNWTME YAGWDPGYPV ESESTEMVEF EYAAATDDDS VDKEDQQEFE PHFHNMGMKI PINPIHVFED AAREFKVDID MMKMKIHKYP
101: PSIQVFDNKF FTVPRLVAIG PYHHGQNQLK QAEKAKYVAA YHCIMESGHS VQDMYDAVVT AAYDSRSLYD KDVMADISED DFLHMMFYDA CFLVQYFALS
201: TNGSSTMDPS LRGFFDFNRK AIRHDIVLLE NQIPWRVVEA VLRFRPVDLK AFVAFWKKYL QDRKVVVEKP LVLDDSFEPP HLLGLLRFYI VGKGNTKTPI
301: EVKTNTISFS VSAIELAENG IKLKANEEET TELIHMGVNK RGIFAELFMA PLSLDDERAS FLINMAALEL CTTSNFQEAE PEESAVCSYL LLLSLLVHRE
401: EDVQELRTKH LLQGGAGLVN KDALTFFTRL QSLPLRGSNC YVRIMMEIEK YKVNRQMQIK VHAFFYKNKR TIFAIFSVVG VLVSILGTLM SLKKRSMV

Best Arabidopsis Sequence Match ( AT3G50160.1 )
(BLAST)

001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT

Arabidopsis Description

Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.