Factsheet for TraesCS1B01G410000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	73.53	74.11
HORVU1Hr1G084670.1	Barley	cytosol	69.22	69.63
TraesCS1B01G409900.1	Wheat	cytosol	51.96	52.17
EES08977	Sorghum	cytosol	49.22	50.4
Zm00001d048651_P001	Maize	cytosol, endoplasmic reticulum, plastid	47.45	44.9
Zm00001d017638_P001	Maize	plasma membrane	42.94	43.28
TraesCS2B01G438000.1	Wheat	cytosol	40.0	39.38
OQU84013	Sorghum	cytosol	39.8	38.3
TraesCS2B01G446800.1	Wheat	cytosol	36.86	38.06
TraesCS2B01G447000.1	Wheat	cytosol, nucleus, peroxisome	38.24	37.94
Zm00001d052775_P001	Maize	nucleus	39.61	36.86
OQU84018	Sorghum	plasma membrane	38.82	36.67
Os11t0278300-00	Rice	cytosol	31.57	35.94
TraesCS7B01G214600.1	Wheat	extracellular	21.57	35.83
TraesCS3B01G072300.1	Wheat	cytosol	28.24	35.73
TraesCS2B01G446700.1	Wheat	cytosol	35.69	35.69
TraesCS6B01G062800.1	Wheat	cytosol	31.37	35.4
Zm00001d024995_P001	Maize	cytosol	34.9	35.32
TraesCS2B01G601000.1	Wheat	cytosol	28.82	34.35
TraesCS7B01G444300.1	Wheat	cytosol	28.04	33.49
TraesCS1B01G021700.1	Wheat	cytosol	32.94	33.4
OQU84015	Sorghum	cytosol	20.2	31.99
TraesCS6B01G466100.1	Wheat	cytosol	37.65	31.84
TraesCS6B01G397600.1	Wheat	cytosol	31.57	31.26
TraesCS6B01G062700.1	Wheat	cytosol	30.39	28.13

Protein Annotations

EnsemblPlants:TraesCS1B01G410000.1	EnsemblPlantsGene:TraesCS1B01G410000	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1B:-:636873554..636875086

Molecular Weight (calculated)

57369.3 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.161

Length

510 amino acids

Sequence
(BLAST)

001: MANLTGRSME PPAAAWPPCG FPSDWSIEPL WIPGYPADSA MCFQTHVPSS SSRGQLQQVQ YTAATTPNLA IQEDDEEEEA QYKTEMKIHD PIQVFAEAAH
101: EFKVDIDMKN MKIHRYPASI QRLGGYYTTP TTVAIGPYHH RKGRLRQAEK VKHVAAYHCI MESGRSIQEM YAAVASVTDE ARRLYHTDMV AGMGDDDFLP
201: MMFYDACFLV QYMLTCTTNG SEMDPSMRNY FDDNNGNIFH DIILLENQLP WRVVKTVMGF RPVSLEEFIT SLKDGLQDRK LTEKSLVLDD SYEPPHLLGL
301: LRFYIVGRSN TKRNSLPQTG SMGIPVSAIE LAEIGIALTA NKTGELIEMG VRNKGTLFAE LFLAPMPLDH VRASWLVNMA AFEVCTTPNF QAVDDKESVV
401: CSYLLLLSMF VDREEDVQEL RRKRLLLGGG GLANKDALDF LIGLHGLPAG SGYLLTMEEI HNYKAKRRTR TRLHAFVYKN LRIIIAFFSA IGVLVSIFGT
501: LMSLKRRSLP

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.