Factsheet for TraesCS1B01G409900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G391700.1	Wheat	cytosol	90.75	89.34
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	57.09	57.31
TraesCS1B01G410000.1	Wheat	cytosol	52.17	51.96
EES08977	Sorghum	cytosol	46.65	47.59
Zm00001d017638_P001	Maize	plasma membrane	45.08	45.26
Zm00001d048651_P001	Maize	cytosol, endoplasmic reticulum, plastid	44.69	42.12
Zm00001d024995_P001	Maize	cytosol	38.58	38.89
Zm00001d052775_P001	Maize	nucleus	41.54	38.5
OQU84013	Sorghum	cytosol	39.17	37.55
TraesCS2B01G438000.1	Wheat	cytosol	38.19	37.45
TraesCS2B01G601000.1	Wheat	cytosol	31.1	36.92
OQU84018	Sorghum	plasma membrane	38.19	35.93
TraesCS2B01G446800.1	Wheat	cytosol	34.65	35.63
TraesCS7B01G214600.1	Wheat	extracellular	21.46	35.5
TraesCS3B01G072300.1	Wheat	cytosol	27.95	35.24
TraesCS2B01G447000.1	Wheat	cytosol, nucleus, peroxisome	35.63	35.21
TraesCS2B01G446700.1	Wheat	cytosol	35.24	35.1
TraesCS1B01G021700.1	Wheat	cytosol	34.06	34.39
Os11t0278300-00	Rice	cytosol	30.32	34.38
TraesCS7B01G444300.1	Wheat	cytosol	28.35	33.72
TraesCS6B01G062800.1	Wheat	cytosol	29.53	33.19
OQU84015	Sorghum	cytosol	20.87	32.92
TraesCS6B01G466100.1	Wheat	cytosol	38.39	32.34
TraesCS6B01G397600.1	Wheat	cytosol	29.53	29.13
TraesCS6B01G062700.1	Wheat	cytosol	27.76	25.59

Protein Annotations

EnsemblPlants:TraesCS1B01G409900.1	EnsemblPlantsGene:TraesCS1B01G409900	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:636860346..636861872

Molecular Weight (calculated)

57704.5 Da

IEP (calculated)

6.303

GRAVY (calculated)

-0.272

Length

508 amino acids

Sequence
(BLAST)

001: MEPAVWPPCD FHLADWSMEP AGAAWVPDEF AWSTEMLVTC FQTYVPSSPS GGQLQQVQYA AATPNSPCEE EAHAENKMEM EIQDPMQVFE KTADEFEVDI
101: DMFDRKMHRY PGLIRRLSDG NKNYTTPVTV AIGPYYHGKD HLKPAEKVKY VAAYHCIMES GHSVQEMYDA VVSVAGEARG LYDKDVMAGI SDNDFEPMMF
201: YDACFLVQFM LKLTGSKLNS YLSRYFKGNM NDIFRDILLL ENQLPWRVVE TVMWFRQVSL PKLVNSLKNG LQDRKVRGRK PLDWEDKYKP PHLLGLVRFY
301: IVGRSKPKPN RQPLPRLESV SISVGAMELA ESGIMLTANK TSDLVDMGID TKGPFCAELS LAPLSLNDLR SVWLVNMAAF ELSTTLEFQG RDVEDEASAV
401: CSYLLLLAMF VDKEEDVHQL RTQSVLQGGG GLTNKEALSF FTSLQDLPLG SRYVRTMKEI ENYRNKQRRK RTRCHAFFHK NWRIMATVFS AVAALITILS
501: TLASLKKQ

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.