Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G001700.1 | Barley | cytosol, nucleus | 50.7 | 55.68 |
| HORVU1Hr1G001580.1 | Barley | nucleus | 55.47 | 53.65 |
| HORVU1Hr1G001600.1 | Barley | cytosol | 29.82 | 51.9 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 55.47 | 51.19 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 34.39 | 34.06 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 20.68 | 33.88 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 34.0 | 33.79 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 26.64 | 33.25 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 34.0 | 33.01 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 33.4 | 32.94 |
| Os11t0278300-00 | Rice | cytosol | 28.83 | 32.37 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 32.6 | 32.16 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 27.24 | 32.08 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 31.41 | 31.98 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 26.84 | 31.54 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 31.61 | 30.93 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 27.24 | 30.31 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 27.04 | 26.41 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 31.21 | 26.04 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 27.83 | 25.41 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G021700.1 | EnsemblPlantsGene:TraesCS1B01G021700 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:9935134..9936645
Molecular Weight (calculated)
57106.7 Da
IEP (calculated)
5.111
GRAVY (calculated)
-0.089
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSWVVP CDSGWSMEDA AAAWSSDHRI SFQTSLPSGS DSGMQLQVVE YAAPATPTHD TCTDQDQVLK EVVQAFNADY LDIMEKKMHR FPPSLVDVDG
101: RYKVPVTVAI GPYHHGHPGR LEAERVKHVA ASQCVTDSGL SLQELYSVVC SVSDDARSLY YHNEAAGKYM GNDDFLPMMF FDGCFLVQFM RWYYPDRDMH
201: EALDSYFYAH FERISTDIMM LENQIPWVVV QAIFNLMPPA ASPWLSPWEQ FVIKMRSGMK NREVSNIDSD DIVVDPTYKP PHLLGLVRFY IVGSEDDRPD
301: FKIHEDMPMS LSISMAELAD IGIELNPKGM QAGLVDMRFS TKPWCFIEFG DLVLPPLYLT EANATWLVNM AAFELCKTPH FGEVNPDLVR DKDSAVCSYI
401: HLFAMLLDRE QHVHELQKKL VIDGGGLTST EALEYFTSIG KNMRLGTFYL DIITQIEIFK KMRSRRLRSY LFLKKYRTTI AAVFSIIVAV VGILSSLQAL
501: KPR
101: RYKVPVTVAI GPYHHGHPGR LEAERVKHVA ASQCVTDSGL SLQELYSVVC SVSDDARSLY YHNEAAGKYM GNDDFLPMMF FDGCFLVQFM RWYYPDRDMH
201: EALDSYFYAH FERISTDIMM LENQIPWVVV QAIFNLMPPA ASPWLSPWEQ FVIKMRSGMK NREVSNIDSD DIVVDPTYKP PHLLGLVRFY IVGSEDDRPD
301: FKIHEDMPMS LSISMAELAD IGIELNPKGM QAGLVDMRFS TKPWCFIEFG DLVLPPLYLT EANATWLVNM AAFELCKTPH FGEVNPDLVR DKDSAVCSYI
401: HLFAMLLDRE QHVHELQKKL VIDGGGLTST EALEYFTSIG KNMRLGTFYL DIITQIEIFK KMRSRRLRSY LFLKKYRTTI AAVFSIIVAV VGILSSLQAL
501: KPR
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.