Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 85.52 | 90.78 |
| HORVU2Hr1G098560.1 | Barley | cytosol, peroxisome | 59.27 | 80.79 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 74.52 | 80.42 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 50.97 | 51.76 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 48.07 | 50.4 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 48.84 | 49.22 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 39.38 | 40.32 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 39.38 | 40.0 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 37.45 | 38.19 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 22.59 | 38.11 |
| Os11t0278300-00 | Rice | cytosol | 30.89 | 35.71 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 27.22 | 34.99 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 33.01 | 34.0 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 27.99 | 33.96 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 27.99 | 33.88 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 27.99 | 32.08 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 35.33 | 30.35 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 26.83 | 26.99 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 25.29 | 23.77 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G438000.1 | EnsemblPlantsGene:TraesCS2B01G438000 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:629814867..629816423
Molecular Weight (calculated)
57006.0 Da
IEP (calculated)
4.882
GRAVY (calculated)
-0.124
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQVPWEYQL AVADYWKGRP AAMEPAATAW VPGLPLELTV AAPAASHGDL AVSSSGQQHQ HQLVMVESTT DHHHQYEWSG PVEAFEEAAQ AFEDKLGRTE
101: TKIHLFPASM VDLAERYAAS RTVSIGPYHH GRSPAVLQME STKHVASWHF VRASGRPVEE LYSAVCAVAD EARGCYDEGR VRGLADDDFK PMMFFDGCFL
201: LQYLLYACTY GDDNDDDEGM AVDQALRSAF SSDNDRIFSD VVLLENQLPW VVVETLMSFL PAPGLDLPKL VGRVKGSLQA RQALDEKPPA WDSSYTPPHL
301: LGLLRYYIVG TGTKLSPESS RGLSEKAEKV SISVSAVELA EMGIQLTATK TGAELKEMGV KKGLLSGELF LAPLSLDDAN AWFLVNMAAL ELCTTPDFSE
401: ADDERSTVCS YLCLLGMVTD RVEDVQQLRT NHILQGGAGL TNEDALRLFI SLEKHLRPGR CYLRTMLEIE NYRVHRPART MVYRFGYKNM KTIISVVTIV
501: GALVGLLEAV KPEGVAGG
101: TKIHLFPASM VDLAERYAAS RTVSIGPYHH GRSPAVLQME STKHVASWHF VRASGRPVEE LYSAVCAVAD EARGCYDEGR VRGLADDDFK PMMFFDGCFL
201: LQYLLYACTY GDDNDDDEGM AVDQALRSAF SSDNDRIFSD VVLLENQLPW VVVETLMSFL PAPGLDLPKL VGRVKGSLQA RQALDEKPPA WDSSYTPPHL
301: LGLLRYYIVG TGTKLSPESS RGLSEKAEKV SISVSAVELA EMGIQLTATK TGAELKEMGV KKGLLSGELF LAPLSLDDAN AWFLVNMAAL ELCTTPDFSE
401: ADDERSTVCS YLCLLGMVTD RVEDVQQLRT NHILQGGAGL TNEDALRLFI SLEKHLRPGR CYLRTMLEIE NYRVHRPART MVYRFGYKNM KTIISVVTIV
501: GALVGLLEAV KPEGVAGG
001: MVDAAEQPPS TSEGESLLKI HIERMHKKLK EPPRLLSSAA GKPTCSIFRV PQSMIDCNGR CYEPRVVSIG PYHRGQTQLK MIEEHKWRYL NVLLTRTQNL
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SJR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.