Factsheet for TraesCS1B01G410200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, golgi, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, golgi, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G391800.1	Wheat	cytosol, golgi, peroxisome	92.09	92.09
TraesCS1A01G383600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	76.48	80.96
HORVU1Hr1G084670.1	Barley	cytosol	75.49	75.35
TraesCS1B01G410000.1	Wheat	cytosol	74.11	73.53
TraesCS1B01G409900.1	Wheat	cytosol	57.31	57.09
EES08977	Sorghum	cytosol	49.01	49.8
Zm00001d048651_P001	Maize	cytosol, endoplasmic reticulum, plastid	49.41	46.38
Zm00001d017638_P001	Maize	plasma membrane	44.66	44.66
OQU84013	Sorghum	cytosol	42.89	40.94
Zm00001d052775_P001	Maize	nucleus	42.69	39.42
TraesCS2B01G438000.1	Wheat	cytosol	40.32	39.38
Os11t0278300-00	Rice	cytosol	34.78	39.29
TraesCS2B01G447000.1	Wheat	cytosol, nucleus, peroxisome	39.13	38.52
TraesCS2B01G446700.1	Wheat	cytosol	38.54	38.24
Zm00001d024995_P001	Maize	cytosol	37.55	37.7
TraesCS3B01G072300.1	Wheat	cytosol	29.84	37.47
OQU84018	Sorghum	plasma membrane	39.53	37.04
TraesCS7B01G214600.1	Wheat	extracellular	22.33	36.81
TraesCS6B01G062800.1	Wheat	cytosol	32.21	36.06
TraesCS2B01G601000.1	Wheat	cytosol	30.43	35.98
TraesCS2B01G446800.1	Wheat	cytosol	34.98	35.83
TraesCS7B01G444300.1	Wheat	cytosol	29.05	34.43
TraesCS1B01G021700.1	Wheat	cytosol	33.79	34.0
OQU84015	Sorghum	cytosol	21.54	33.85
TraesCS6B01G466100.1	Wheat	cytosol	39.72	33.33
TraesCS6B01G397600.1	Wheat	cytosol	32.41	31.84
TraesCS6B01G062700.1	Wheat	cytosol	30.83	28.31

Protein Annotations

EnsemblPlants:TraesCS1B01G410200.1	EnsemblPlantsGene:TraesCS1B01G410200	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1B:-:637352695..637354215

Molecular Weight (calculated)

57119.7 Da

IEP (calculated)

5.642

GRAVY (calculated)

-0.171

Length

506 amino acids

Sequence
(BLAST)

001: MADLTGRSME PPAAAWPPCG FPANWSLEPV WAPGFPVESA MWFQTHASSS SSEEQLQQLR YGAATTPNLA IQEEEEAQYK MEMEIHDPIQ VFAEAAHEFK
101: ININMRDMKI HRYPASIQRL EACYTTPTTV AIGPYHHGED RLRPAEKVKH VAAYHCIMES GRSVQEMYAT VASVAGEARG LYDKDMVAGI GDDDFLPMMF
201: YDACFLVQYM LTCTSGGSEM DPSLRSYFDG NDSNIFHDIL LLENQLPWRV VKTVMGFRPV LLEEFITYLK DGLQDRKLTE KKSPALDDSY EPPHLLGLLR
301: FYIVGRSNIK RTRLPQTESM SFSVSAIELA EIGITLTANK TSELIEMGVK NKRVLFAEIS LPSLSLDHAR ASWLINMAAF EVCTTPNFQA VEDEESVVSS
401: YLLLFAMLVD REEDVHELRR KRLLQGGGGL TNKEALDFFT GLQGLPLGSS YIRIMEEIEN YRVKRRTRTK LHAFVYKNLR IIVTVFSAVG FLAGVFGSLM
501: SLRRRS

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.