Factsheet for HORVU1Hr1G084670.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G391800.1	Wheat	cytosol, golgi, peroxisome	76.53	76.68
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	75.35	75.49
TraesCS1A01G383600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	66.08	70.08
TraesCS1B01G410000.1	Wheat	cytosol	69.63	69.22
EES08977	Sorghum	cytosol	51.68	52.61
Zm00001d048651_P001	Maize	cytosol, endoplasmic reticulum, plastid	52.27	49.17
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	36.69	48.95
Zm00001d017638_P001	Maize	plasma membrane	46.35	46.44
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	24.26	42.41
OQU84013	Sorghum	cytosol	43.59	41.7
Zm00001d052775_P001	Maize	nucleus	43.59	40.33
Zm00001d024995_P001	Maize	cytosol	39.25	39.48
HORVU2Hr1G099720.1	Barley	cytosol	38.46	39.31
Os11t0278300-00	Rice	cytosol	34.12	38.62
OQU84018	Sorghum	plasma membrane	39.84	37.41
HORVU3Hr1G011030.1	Barley	cytosol	32.15	37.39
HORVU0Hr1G017830.1	Barley	cytosol	39.05	37.29
HORVU6Hr1G094220.1	Barley	cytosol	22.68	36.86
OQU84015	Sorghum	cytosol	23.08	36.34
HORVU1Hr1G001690.1	Barley	cytosol	35.5	35.93
HORVU1Hr1G001610.1	Barley	cytosol	35.5	35.93
HORVU3Hr1G011300.1	Barley	cytosol	30.97	35.76
HORVU1Hr1G091250.1	Barley	nucleus	34.52	34.38
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	30.77	34.06
HORVU1Hr1G001680.1	Barley	cytosol	18.15	33.7
HORVU1Hr1G001600.1	Barley	cytosol	18.74	32.87
HORVU4Hr1G066650.2	Barley	cytosol	18.34	32.63
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	28.8	31.95
HORVU1Hr1G055270.1	Barley	cytosol	21.1	31.66
HORVU1Hr1G001580.1	Barley	nucleus	30.77	30.0
HORVU1Hr1G091220.1	Barley	cytosol	26.82	25.37

Protein Annotations

EnsemblPlants:HORVU1Hr1G084670.1	EnsemblPlantsGene:HORVU1Hr1G084670	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
ncoils:Coil	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296E8DB	UniProt:M0W7T9	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:534261953..534264015

Molecular Weight (calculated)

57100.5 Da

IEP (calculated)

5.658

GRAVY (calculated)

-0.274

Length

507 amino acids

Sequence
(BLAST)

001: MEPPAAAAAW PPYYGFPANW SLQPVWAPGF PFESPMWFQQ AHAPGSSSGG QLQQVEEEAH FPIQEEEEEE EEEEAQYKTE MKIHDPIQAF AEAAREFKVD
101: IDMRDMKIHR YPASIQRLGV YYTTPTTVAI GPYHHGEGRL KPAEKVKHVA AYHCIMESGR SVQEMYAAVA SLAGEARGLY DKDAVAGIGE DDFLPMMFYD
201: ACFLVQYMLT CTAGGGGSGM DPSLRSYFDG NDSDIFHDIM LLENQLPWRV VEAVMRFRPV PLEEFITSLK DGLQDRKLTE KKPPALDEGY EPPHLLGLLR
301: FYIVGRSNTR RSRLPQTESM SFSVSAIELA EIGITLTANK TSELIEMGVK KNKRALFAKL SLASLSLDHA RASWLANMAA LEVCTTPNFQ AVDDEESVVC
401: SYLLLLSMMA DREEDVHELR RKRLLQGGGG LTNKEALDFF TRLQGLPLGS SYIRTMEEIE NYRVKRRKRT KLHAFIYKNL RIIITVFSVL GVLAGIFGSL
501: MSLRRRS

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.