Factsheet for HORVU3Hr1G011030.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G011300.1	Barley	cytosol	75.92	75.4
TraesCS7A01G072600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	64.68	69.46
TraesCS4A01G370900.1	Wheat	cytosol	64.22	69.14
TraesCS3B01G072300.1	Wheat	cytosol	49.08	53.1
HORVU1Hr1G091250.1	Barley	nucleus	44.04	37.72
HORVU4Hr1G066650.2	Barley	cytosol	23.85	36.49
Os11t0278300-00	Rice	cytosol	37.39	36.38
HORVU6Hr1G094220.1	Barley	cytosol	25.23	35.26
HORVU0Hr1G017830.1	Barley	cytosol	41.97	34.46
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	35.55	33.92
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	29.13	33.42
HORVU1Hr1G084670.1	Barley	cytosol	37.39	32.15
HORVU2Hr1G099720.1	Barley	cytosol	34.86	30.65
HORVU1Hr1G001600.1	Barley	cytosol	20.18	30.45
HORVU1Hr1G091220.1	Barley	cytosol	35.55	28.92
HORVU1Hr1G001690.1	Barley	cytosol	32.8	28.54
HORVU1Hr1G001610.1	Barley	cytosol	32.8	28.54
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	29.82	28.38
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	18.58	27.93
HORVU1Hr1G001680.1	Barley	cytosol	16.74	26.74
HORVU1Hr1G001580.1	Barley	nucleus	30.05	25.19
HORVU1Hr1G055270.1	Barley	cytosol	19.5	25.15

Protein Annotations

EnsemblPlants:HORVU3Hr1G011030.1	EnsemblPlantsGene:HORVU3Hr1G011030	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
ncoils:Coil	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix
UniParc:UPI000295B072	UniProt:M0UFQ5	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:24221666..24223877

Molecular Weight (calculated)

49223.2 Da

IEP (calculated)

8.943

GRAVY (calculated)

-0.116

Length

436 amino acids

Sequence
(BLAST)

001: MAVVVIPQES TRIPVEEWKQ AARELKADRR DMESMFHRFP VSLMDLGKRY TDPLVVAIGP YHHGKAELIE MEKLKGAAAH RFIKDSGRSP EEIHKAVFDI
101: AQQFRRFYVG VSVEVARMTA DEFATMMLLD ACFLLQYARV MDADSQHPTD ASLQHVFMSN RVCIENDIML LENQIPWSMV QELNGLTGAP APLAKFISTM
201: ESTFKINGHR QSAEPFLQYS GGHGLHLLAL FRLEKIGRNR TGGVPESSST AITASATELA KMAIKLKPCG TPDFMDMGIW TGKLSGNLHL APLFLDETRA
301: CWLVNMAALE VCTASNERED DIMKKKTAVC SYLALFAMLV NREEDVQELR TKRLVQANLT DKETLDFFKS IVKHMDGGRL YTGIMGEISR YKWRKKRWIK
401: VHGFIKDNKK TIIAVLSIIA VLVGIFKTLL SIKTHQ

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.