Factsheet for HORVU1Hr1G055270.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G001690.1	Barley	cytosol	85.21	57.48
HORVU1Hr1G001610.1	Barley	cytosol	85.21	57.48
HORVU1Hr1G001680.1	Barley	cytosol	39.35	48.72
TraesCS1D01G017100.1	Wheat	cytosol	49.41	33.87
HORVU1Hr1G001580.1	Barley	nucleus	49.41	32.12
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	39.05	28.82
HORVU1Hr1G084670.1	Barley	cytosol	31.66	21.1
HORVU3Hr1G011030.1	Barley	cytosol	25.15	19.5
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	21.3	18.95
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	24.56	18.16
HORVU1Hr1G091250.1	Barley	nucleus	26.92	17.88
HORVU3Hr1G011300.1	Barley	cytosol	23.08	17.77
HORVU2Hr1G099720.1	Barley	cytosol	26.04	17.74
HORVU0Hr1G017830.1	Barley	cytosol	27.51	17.51
Os11t0278300-00	Rice	cytosol	23.08	17.41
HORVU1Hr1G091220.1	Barley	cytosol	21.3	13.43
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	9.47	11.03
HORVU1Hr1G001600.1	Barley	cytosol	8.88	10.38
HORVU4Hr1G066650.2	Barley	cytosol	8.58	10.18
HORVU6Hr1G094220.1	Barley	cytosol	8.88	9.62

Protein Annotations

EnsemblPlants:HORVU1Hr1G055270.1	EnsemblPlantsGene:HORVU1Hr1G055270	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
SEG:seg	UniParc:UPI000B4862C1	UniProt:A0A287FP46	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr1H:-:405161212..405162740

Molecular Weight (calculated)

38830.0 Da

IEP (calculated)

4.832

GRAVY (calculated)

-0.399

Length

338 amino acids

Sequence
(BLAST)

001: MSMEPSSWVV PCDSGWSMEE AAAAWSSDHR ISFQTSLPSH SDSGMQLQVV EYAAPPTATA TATHDNDCSY PIQVFEEAVQ PFRADYLDSM ERKMHKFPPS
101: LIDMDGTRYT APVIVAIGPY HHGNSDVLEA EKMKHVAATQ CMRESTRSPQ EMYNAVFFVS PDARNLYYQD EEESAKFGDD NFLPMMFVDA CFLVQFMRWY
201: DVSEDDMDAA LVIYFNANYE HICTDIMMLE NQIPWVVVEA ILGCMPPAPS PRPWEAFAIA MRRSLKNQAD DAKSKMDDTV VARQYEPPHL LGLVWFYIVD
301: KTQEGRSPLW RLAHVIFYDR RRTCRLLESR SNPRRKQK

Best Arabidopsis Sequence Match ( AT3G50160.1 )
(BLAST)

001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT

Arabidopsis Description

Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.