Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G001690.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU1Hr1G055270.1 | Barley | cytosol | 57.48 | 85.21 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 54.09 | 54.97 |
| HORVU1Hr1G001580.1 | Barley | nucleus | 51.1 | 49.23 |
| HORVU1Hr1G001700.1 | Barley | cytosol, nucleus | 44.91 | 49.13 |
| HORVU1Hr1G001680.1 | Barley | cytosol | 25.95 | 47.62 |
| HORVU1Hr1G001600.1 | Barley | cytosol | 25.15 | 43.6 |
| HORVU1Hr1G084670.1 | Barley | cytosol | 35.93 | 35.5 |
| HORVU2Hr1G098560.1 | Barley | cytosol, peroxisome | 26.15 | 34.47 |
| HORVU2Hr1G099740.1 | Barley | cytosol, peroxisome, plastid, vacuole | 19.56 | 33.79 |
| HORVU3Hr1G011030.1 | Barley | cytosol | 28.54 | 32.8 |
| HORVU3Hr1G011300.1 | Barley | cytosol | 27.74 | 31.66 |
| HORVU2Hr1G099720.1 | Barley | cytosol | 30.14 | 30.44 |
| HORVU0Hr1G017830.1 | Barley | cytosol | 31.94 | 30.13 |
| HORVU4Hr1G087220.1 | Barley | cytosol, peroxisome | 27.35 | 29.98 |
| Os11t0278300-00 | Rice | cytosol | 26.15 | 29.24 |
| HORVU6Hr1G094220.1 | Barley | cytosol | 18.16 | 29.17 |
| HORVU1Hr1G091250.1 | Barley | nucleus | 29.34 | 28.88 |
| HORVU4Hr1G066650.2 | Barley | cytosol | 14.17 | 24.91 |
| HORVU1Hr1G091220.1 | Barley | cytosol | 24.55 | 22.95 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G001610.1 | EnsemblPlantsGene:HORVU1Hr1G001610 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002949470 |
| UniProt:M0X7A5 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:3739193..3741286
Molecular Weight (calculated)
56750.2 Da
IEP (calculated)
5.239
GRAVY (calculated)
-0.217
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSSWVV PCDSGWSMEE AAAAWSSDHR ISFQTSLPSH SDSGMQLQVV EYAAPPTATA TATHDNDCSY PIQVFEEAVQ PFRADYLDSM ERKMHKFPPS
101: LIDMDGTRYT APVIVAIGPY HHGNSDVLEA EKMKHVAATQ CMRESTRSPQ EMYNAVFFVS PDARNLYYQD EEESAKFGDD NFLPMMFVDA CFLVQFMRWY
201: DVSEDDMDAA LVIYFNANYE HICTDIMMLE NQIPWVVVEA ILGCMPPAPS PRPWEAFAIA MRRSLKNQAD DAKSKMDDTV VARQYEPPHL LGLVWFYIVA
301: KHKKEDLPSG DWPMSYSMTV AELADIGITF KPKKETEVGL VGMGLEKKPP IFRAISVQPL CLTNTNATWL INMAAFELCS TPDFENSYDE NSDVCSYLQL
401: FGMLLDQKKH VHDLREKDVI QGGGLTSKDT LEFFTLIGKN MRIGRSYLRL IKEIERFKQK RRISIKMWLF GKKHGRTIAA VISAIGVIIG ILSSLQALKP
501: R
101: LIDMDGTRYT APVIVAIGPY HHGNSDVLEA EKMKHVAATQ CMRESTRSPQ EMYNAVFFVS PDARNLYYQD EEESAKFGDD NFLPMMFVDA CFLVQFMRWY
201: DVSEDDMDAA LVIYFNANYE HICTDIMMLE NQIPWVVVEA ILGCMPPAPS PRPWEAFAIA MRRSLKNQAD DAKSKMDDTV VARQYEPPHL LGLVWFYIVA
301: KHKKEDLPSG DWPMSYSMTV AELADIGITF KPKKETEVGL VGMGLEKKPP IFRAISVQPL CLTNTNATWL INMAAFELCS TPDFENSYDE NSDVCSYLQL
401: FGMLLDQKKH VHDLREKDVI QGGGLTSKDT LEFFTLIGKN MRIGRSYLRL IKEIERFKQK RRISIKMWLF GKKHGRTIAA VISAIGVIIG ILSSLQALKP
501: R
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.