Factsheet for HORVU0Hr1G017830.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G094220.1	Barley	cytosol	37.48	63.78
TraesCS7A01G496100.1	Wheat	cytosol, nucleus, plasma membrane	60.64	62.65
TraesCS3D01G512000.1	Wheat	cytosol	43.5	61.93
TraesCS6B01G466100.1	Wheat	cytosol	58.95	51.91
TraesCS6D01G400600.1	Wheat	cytosol	52.35	47.77
Os11t0278300-00	Rice	cytosol	36.53	43.3
HORVU1Hr1G091250.1	Barley	nucleus	40.68	42.44
HORVU3Hr1G011030.1	Barley	cytosol	34.46	41.97
HORVU3Hr1G011300.1	Barley	cytosol	34.46	41.69
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	28.81	40.26
HORVU1Hr1G084670.1	Barley	cytosol	37.29	39.05
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	32.96	38.29
HORVU4Hr1G066650.2	Barley	cytosol	19.59	36.49
HORVU2Hr1G099720.1	Barley	cytosol	32.02	34.27
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	18.27	33.45
HORVU1Hr1G001690.1	Barley	cytosol	30.13	31.94
HORVU1Hr1G001610.1	Barley	cytosol	30.13	31.94
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	27.5	31.88
HORVU1Hr1G001600.1	Barley	cytosol	16.2	29.76
HORVU1Hr1G001680.1	Barley	cytosol	15.25	29.67
HORVU1Hr1G091220.1	Barley	cytosol	29.94	29.66
HORVU1Hr1G001580.1	Barley	nucleus	28.25	28.85
HORVU1Hr1G055270.1	Barley	cytosol	17.51	27.51

Protein Annotations

EnsemblPlants:HORVU0Hr1G017830.1	EnsemblPlantsGene:HORVU0Hr1G017830	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B48103A
UniProt:A0A287E4R8	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:93235744..93237524

Molecular Weight (calculated)

60809.9 Da

IEP (calculated)

8.093

GRAVY (calculated)

-0.199

Length

531 amino acids

Sequence
(BLAST)

001: DSTVEAMAMD SAQAGVAPLA EEEYMKKSAQ EFKAAFPFEI RDVRGIPSYS RKQVEDEEIV EFAEAVPAPV EKEYLKKAAE EFKVDFNKRQ EKMHRFPASL
101: RGLGSHYIVP RVVAIGPYHH GSPHLGQMEK VKHVAAYHFT TGSGHSLEKI YEAVVKVADK ARRFYGDDTA PCISHADFAA MMFYDACFLL EFMLSGDMEK
201: FLDPEMLCFF SSNAEHIYND VMLLENQLPW LVVETLLNFR SVAVKKRISM MGEGLTNRMY HTRPEEILPY MDEEYKPPHL LGLLRFYKTN RKKTIEASNI
301: AYTDQIVSIR KMGNRTIGNR TIGEPRLLRT ERHISTAKSR KTLSSMSICT SAIELAEIGI KLKAIKTGSF TEIGIRKGPL FGELFLTPVV LSSTMACWLV
401: NMAAFEVCMT SGYQEDDEEM AVCSYIALIS MLMDREEDVH ELRTKHIVQG EFTNKEMLEF FKSLTKHLSA GRSYHRILRR TESYKVKRWM WIQVHKFIYN
501: NFRTIVTVFS VVGVLVGIFK TLLSLKQHQP I

Best Arabidopsis Sequence Match ( AT3G47200.1 )
(BLAST)

001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP

Arabidopsis Description

UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.