Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G094220.1 | Barley | cytosol | 44.5 | 53.21 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 64.61 | 46.89 |
| HORVU0Hr1G017830.1 | Barley | cytosol | 61.93 | 43.5 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 29.76 | 36.16 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 57.1 | 35.32 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 54.69 | 35.05 |
| Os11t0278300-00 | Rice | cytosol | 37.53 | 31.25 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 39.68 | 29.25 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 32.17 | 26.91 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 35.66 | 25.78 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 32.71 | 25.58 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.44 | 24.8 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 32.17 | 24.29 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 30.03 | 22.72 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 25.74 | 22.43 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 30.29 | 22.2 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 29.76 | 21.81 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 20.38 | 17.47 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G512000.1 | EnsemblPlantsGene:TraesCS3D01G512000 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:596779854..596781843
Molecular Weight (calculated)
42254.2 Da
IEP (calculated)
9.022
GRAVY (calculated)
-0.210
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAEVVPSP VEEYLTKAAQ EFQAGLSNEI TDVRDLPSCS HEQVDEDMDF AKAAPATPVE EYLRKAAQEF RVDFDKRKEK MHRFSASLHG LGSCYTVPRV
101: VAIGPYHHAH PSSVRWRRPV AVQVKKLISA MGGGLTNRLY HNGPDEILSE LDEEYAPPHL LGLLRFYKTT NNTKRHMPTA KKKPSKRVSS MSASTSAIEL
201: AEIGIKLKAI KTGSFTEIGI RKGPLFGELY LTPLVLSSTR ACWLVNMAAF EVCTTSGDLY NDEETSVCSY FALLSMLMDR EDDVHELRRK HLVLGELTNK
301: EMLEFFKSLT KLLSIGPSYF RILTRIENYK VNRWMWIKVH KFIYNNFKII VTVFTVVGVP VGIFKTLLSL KQQ
101: VAIGPYHHAH PSSVRWRRPV AVQVKKLISA MGGGLTNRLY HNGPDEILSE LDEEYAPPHL LGLLRFYKTT NNTKRHMPTA KKKPSKRVSS MSASTSAIEL
201: AEIGIKLKAI KTGSFTEIGI RKGPLFGELY LTPLVLSSTR ACWLVNMAAF EVCTTSGDLY NDEETSVCSY FALLSMLMDR EDDVHELRRK HLVLGELTNK
301: EMLEFFKSLT KLLSIGPSYF RILTRIENYK VNRWMWIKVH KFIYNNFKII VTVFTVVGVP VGIFKTLLSL KQQ
001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
Arabidopsis Description
UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.