Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G087220.1 | Barley | cytosol, peroxisome | 66.14 | 64.55 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.25 | 41.04 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 40.58 | 35.15 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 26.91 | 32.17 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 33.86 | 31.66 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 30.27 | 31.54 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 33.63 | 29.64 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.29 | 29.51 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 36.77 | 28.18 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 30.49 | 27.53 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 30.94 | 26.74 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 29.6 | 25.93 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 28.48 | 25.76 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 26.91 | 23.58 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.3 | 21.84 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G424700.1 | EnsemblPlantsGene:TraesCS7D01G424700 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:545255127..545256467
Molecular Weight (calculated)
49076.4 Da
IEP (calculated)
6.374
GRAVY (calculated)
0.116
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTSISNSVH TPIIVEIPGE LDELSQASQK LETAYSNIFN KIHRFPASLR SLDGDYIVPR MVSIGAYHHG RPELQGMEEI KKAAAHQFCR DSGHSPEAVY
101: EKVLAVAGDA RSCYTDGGAA GALEGDDFAS MMLRDGCFLL QLVLWFLQDC SGDGKRGPPP FTCQVNSLAL LRDLFLLENQ IPWAVLEALM ACRAAVFPAA
201: LCEFVVYMGK FFQLHTDTDL LAKPLDLDGG YRPAHLLALL HFHQSGGSST TEELRLRGLS SLPPVVTNAV DFAEMGIKLA PSKTAEFRDM ALTQGLLFPE
301: LSMPPLYLAE LTASWLVNMA AFEASTGVPH GATSGEYTVS SYLTLLSALM DREEDVRELC AKRLVQSELT DGRTLAFFKG GLTSYAYVND RYMAILSQIA
401: GYRRRRRLWI AVHKFVYTNF RTIVTLLSVV SVLVGLFKAL LSLSKA
101: EKVLAVAGDA RSCYTDGGAA GALEGDDFAS MMLRDGCFLL QLVLWFLQDC SGDGKRGPPP FTCQVNSLAL LRDLFLLENQ IPWAVLEALM ACRAAVFPAA
201: LCEFVVYMGK FFQLHTDTDL LAKPLDLDGG YRPAHLLALL HFHQSGGSST TEELRLRGLS SLPPVVTNAV DFAEMGIKLA PSKTAEFRDM ALTQGLLFPE
301: LSMPPLYLAE LTASWLVNMA AFEASTGVPH GATSGEYTVS SYLTLLSALM DREEDVRELC AKRLVQSELT DGRTLAFFKG GLTSYAYVND RYMAILSQIA
401: GYRRRRRLWI AVHKFVYTNF RTIVTLLSVV SVLVGLFKAL LSLSKA
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.