Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G446800.1 | Wheat | cytosol | 96.96 | 96.96 |
| HORVU2Hr1G099720.1 | Barley | cytosol | 84.01 | 83.67 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 79.96 | 79.48 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 46.76 | 47.34 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 48.38 | 46.95 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 22.67 | 36.48 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 36.23 | 35.38 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 35.83 | 34.3 |
| Os11t0278300-00 | Rice | cytosol | 30.16 | 33.26 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 33.2 | 32.22 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 24.29 | 32.17 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 27.53 | 30.49 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 30.36 | 30.43 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 33.81 | 28.69 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 27.13 | 28.09 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 24.7 | 28.05 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 23.28 | 26.87 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G424600.1 | EnsemblPlantsGene:TraesCS2D01G424600 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2D:+:537338356..537339840
Molecular Weight (calculated)
55185.9 Da
IEP (calculated)
5.070
GRAVY (calculated)
-0.243
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPCDYQLA VADYWDGRPA MEPTAWVAGL PLQMTVAAPS NSDLVVSSSG RQQLKQVDEY DHYAVQVFEQ AAESLKERVE EMETKMHLFP PSMGDLADEY
101: AAPKVVSIGP YHHGRTPALQ EMESVKHAAA CHFVKATGRP IQEVYWAVCT VAEEARAHYD AGRLGALGDD DFKPMMFLDG CFLLQYMQFW CRESGGDEDP
201: DMDPSLYNAF SSIDRPILSD VVLLENQLPW VVIDALLSFL PPPGLDMETL IGRVKQTLQT RQVRYFDAPK LDHTPPHLLG LLRHHIVGSN DTKKSEPELS
301: ERAKELSVSV SAMELAEIGI EITATKATRE GAELRNMGVR RSAYLTGELF LAPLSLNDAN ATFLVNMAAL EQCTTPDFFG EDEEKSAVCS YLCLLGMVTD
401: SEEDVQQLRK KGILQGGAGL SNRDALDLLN KLENRLRPGT HYLSTMILIQ NYKTDRWKRI QFHKFHYNHR KAIFLTFSGV AGFASFLGTL KSLK
101: AAPKVVSIGP YHHGRTPALQ EMESVKHAAA CHFVKATGRP IQEVYWAVCT VAEEARAHYD AGRLGALGDD DFKPMMFLDG CFLLQYMQFW CRESGGDEDP
201: DMDPSLYNAF SSIDRPILSD VVLLENQLPW VVIDALLSFL PPPGLDMETL IGRVKQTLQT RQVRYFDAPK LDHTPPHLLG LLRHHIVGSN DTKKSEPELS
301: ERAKELSVSV SAMELAEIGI EITATKATRE GAELRNMGVR RSAYLTGELF LAPLSLNDAN ATFLVNMAAL EQCTTPDFFG EDEEKSAVCS YLCLLGMVTD
401: SEEDVQQLRK KGILQGGAGL SNRDALDLLN KLENRLRPGT HYLSTMILIQ NYKTDRWKRI QFHKFHYNHR KAIFLTFSGV AGFASFLGTL KSLK
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.