Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G017500.1 | Wheat | cytosol | 93.71 | 93.71 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.83 | 62.99 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 57.96 | 59.84 |
| HORVU1Hr1G001680.1 | Barley | cytosol | 26.92 | 50.18 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 35.56 | 35.08 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 34.77 | 34.98 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 33.99 | 33.99 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 32.22 | 33.2 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 19.84 | 32.9 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 30.65 | 31.97 |
| Os11t0278300-00 | Rice | cytosol | 26.92 | 30.58 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 21.81 | 29.76 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 32.42 | 28.35 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 23.58 | 26.91 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 25.15 | 26.83 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 21.61 | 25.7 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G017300.1 | EnsemblPlantsGene:TraesCS1D01G017300 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1D:+:7768698..7770227
Molecular Weight (calculated)
57531.7 Da
IEP (calculated)
5.136
GRAVY (calculated)
-0.082
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSSWVV PCYSGWSMEE AALWNSEDRI SFQTSLPSHS DSVQLQMVEY AAPATPTPTQ DNDCSDPTIQ VFKEVVQSFH TDYLDSMERK MHKIPPSLIG
101: VGTWYIQPVT VAIGPYHHGL RPGLLEAERV KHVAATQCIT DSGRPVQEMY DAVFAVSADA HSLYYPDELA RFRDDDFLPM MFLDGCFLVQ FMRCYGDDVD
201: GMDEALNRYF CANYERIYTD IMMLENQIPW VVVQNILKFM PEPSLWEDFV AAMRAGMKNQ MNSKKVPPID VVPTYEPPHL LGLVRFYIVG NNDDIKVDRP
301: TAPGGDKPMS LSISVAELAD VGITIVPETE KTGLVHMTLE KKRLVHRRLG GKKFGFLFGD LRVPPLFPTD ANATWLVNMA AFELCKTPDF EGADVKDEDS
401: AVCSYLHLFA MLLDQDEHVH DLRKTKVIEG GGLTSKEMLE LFTGIGKNMR LGKCYLDIII EIEKFKQRRS IWLKLYLFFI KHWTKIMAVV TVLGAVIGIL
501: SSLQALKPS
101: VGTWYIQPVT VAIGPYHHGL RPGLLEAERV KHVAATQCIT DSGRPVQEMY DAVFAVSADA HSLYYPDELA RFRDDDFLPM MFLDGCFLVQ FMRCYGDDVD
201: GMDEALNRYF CANYERIYTD IMMLENQIPW VVVQNILKFM PEPSLWEDFV AAMRAGMKNQ MNSKKVPPID VVPTYEPPHL LGLVRFYIVG NNDDIKVDRP
301: TAPGGDKPMS LSISVAELAD VGITIVPETE KTGLVHMTLE KKRLVHRRLG GKKFGFLFGD LRVPPLFPTD ANATWLVNMA AFELCKTPDF EGADVKDEDS
401: AVCSYLHLFA MLLDQDEHVH DLRKTKVIEG GGLTSKEMLE LFTGIGKNMR LGKCYLDIII EIEKFKQRRS IWLKLYLFFI KHWTKIMAVV TVLGAVIGIL
501: SSLQALKPS
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.